LOCUS BC003551 1781 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens transglutaminase 2 (C polypeptide,
protein-glutamine-gamma-glutamyltransferase), mRNA (cDNA clone
MGC:1193 IMAGE:3544757), complete cds.
ACCESSION BC003551
VERSION BC003551.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1781)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1781)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (20-FEB-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 8 Row: d Column: 10
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 39777596.
FEATURES Location/Qualifiers
source 1..1781
/db_xref="H-InvDB:HIT000031589"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:1193 IMAGE:3544757"
/tissue_type="Kidney, renal cell adenocarcinoma"
/clone_lib="NIH_MGC_14"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1781
/gene="TGM2"
/gene_synonym="TG2"
/gene_synonym="TGC"
/db_xref="GeneID:7052"
/db_xref="HGNC:HGNC:11778"
/db_xref="MIM:190196"
CDS 85..1731
/gene="TGM2"
/gene_synonym="TG2"
/gene_synonym="TGC"
/codon_start=1
/product="transglutaminase 2 (C polypeptide,
protein-glutamine-gamma-glutamyltransferase)"
/protein_id="AAH03551.1"
/db_xref="GeneID:7052"
/db_xref="HGNC:HGNC:11778"
/db_xref="MIM:190196"
/translation="MAEELVLERCDLELETNGRDHHTADLCREKLVVRRGQPFWLTLH
FEGRNYEASVDSLTFSVVTGPAPSQEAGTKARFPLRDAVEEGDWTATVVDQQDCTLSL
QLTTPANAPIGLYRLSLEASTGYQGSSFVLGHFILLFNAWCPADAVYLDSEEERQEYV
LTQQGFIYQGSAKFIKNIPWNFGQFEDGILDICLILLDVNPKFLKNAGRDCSRRSSPV
YVGRVVSGMVNCNDDQGVLLGRWDNNYGDGVSPMSWIGSVDILRRWKNHGCQRVKYGQ
CWVFAAVACTVLRCLGIPTRVVTNYNSAHDQNSNLLIEYFRNEFGEIQGDKSEMIWNF
HCWVESWMTRPDLQPGYEGWQALDPTPQEKSEGTYCCGPVPVRAIKEGDLSTKYDAPF
VFAEVNADVVDWIQQDDGSVHKSINRSLIVGLKISTKSVGRDEREDITHTYKYPEGSS
EEREAFTRANHLNKLAEKEETGMAMRIRVGQSMNMGSDFDVFAHITNNTAEEYVCRLL
LCARTVSYNGILGPECGTKYLLNLNLEPFSGKALCSWSIC"
BASE COUNT 384 a 531 c 544 g 322 t
ORIGIN
1 ctccgcctcg gcagtgccag ccgccagtgg tcgcacttgg agggtctcgc cgccagtgga
61 aggagccacc gcccccgccc gaccatggcc gaggagctgg tcttagagag gtgtgatctg
121 gagctggaga ccaatggccg agaccaccac acggccgacc tgtgccggga gaagctggtg
181 gtgcgacggg gccagccctt ctggctgacc ctgcactttg agggccgcaa ctacgaggcc
241 agtgtagaca gtctcacctt cagtgtcgtg accggcccag cccctagcca ggaggccggg
301 accaaggccc gttttccact aagagatgct gtggaggagg gtgactggac agccaccgtg
361 gtggaccagc aagactgcac cctctcgctg cagctcacca ccccggccaa cgcccccatc
421 ggcctgtatc gcctcagcct ggaggcctcc actggctacc agggatccag ctttgtgctg
481 ggccacttca ttttgctctt caacgcctgg tgcccagcgg atgctgtgta cctggactcg
541 gaagaggagc ggcaggagta tgtcctcacc cagcagggct ttatctacca gggctcggcc
601 aagttcatca agaacatacc ttggaatttt gggcagtttg aagatgggat cctagacatc
661 tgcctgatcc ttctagatgt caaccccaag ttcctgaaga acgccggccg tgactgctcc
721 cgccgcagca gccccgtcta cgtgggccgg gtggtgagtg gcatggtcaa ctgcaacgat
781 gaccagggtg tgctgctggg acgctgggac aacaactacg gggacggcgt cagccccatg
841 tcctggatcg gcagcgtgga catcctgcgg cgctggaaga accacggctg ccagcgcgtc
901 aagtatggcc agtgctgggt cttcgccgcc gtggcctgca cagtgctgag gtgcctgggc
961 atccctaccc gcgtcgtgac caactacaac tcggcccatg accagaacag caaccttctc
1021 atcgagtact tccgcaatga gtttggggag atccagggtg acaagagcga gatgatctgg
1081 aacttccact gctgggtgga gtcgtggatg accaggccgg acctgcagcc ggggtacgag
1141 ggctggcagg ccctggaccc aacgccccag gagaagagcg aagggacgta ctgctgtggc
1201 ccagttccag ttcgtgccat caaggagggc gacctgagca ccaagtacga tgcgcccttt
1261 gtctttgcgg aggtcaatgc cgacgtggta gactggatcc agcaggacga tgggtctgtg
1321 cacaaatcca tcaaccgttc cctgatcgtt gggctgaaga tcagcactaa gagcgtgggc
1381 cgagacgagc gggaggatat cacccacacc tacaaatacc cagaggggtc ctcagaggag
1441 agggaggcct tcacaagggc gaaccacctg aacaaactgg ccgagaagga ggagacaggg
1501 atggccatgc ggatccgtgt gggccagagc atgaacatgg gcagtgactt tgacgtcttt
1561 gcccacatca ccaacaacac cgctgaggag tacgtctgcc gcctcctgct ctgtgcccgc
1621 accgtcagct acaatgggat cttggggccc gagtgtggca ccaagtacct gctcaacctc
1681 aacctggagc ctttctctgg taaagccctg tgttcctgga gcatttgttg accgccaact
1741 gacaacatgc taggtagtga cctaaaaaaa aaaaaaaaaa a
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