LOCUS BC003536 1420 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens zinc finger, BED-type containing 2, mRNA (cDNA clone
MGC:10796 IMAGE:3609995), complete cds.
ACCESSION BC003536
VERSION BC003536.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1420)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1420)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (20-FEB-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 13 Row: e Column: 17
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 56790946.
FEATURES Location/Qualifiers
source 1..1420
/db_xref="H-InvDB:HIT000031579"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:10796 IMAGE:3609995"
/tissue_type="Uterus, endometrium adenocarcinoma"
/clone_lib="NIH_MGC_44"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1420
/gene="ZBED2"
/gene_synonym="MGC10796"
/db_xref="GeneID:79413"
/db_xref="HGNC:HGNC:20710"
CDS 90..743
/gene="ZBED2"
/gene_synonym="MGC10796"
/codon_start=1
/product="zinc finger, BED-type containing 2"
/protein_id="AAH03536.1"
/db_xref="GeneID:79413"
/db_xref="HGNC:HGNC:20710"
/translation="MRREDEEEEGTMMKAKGDLEMKEEEEISETGELVGPFVSAMPTP
MPHNKGTRFSEAWEYFHLAPARAGHHPNQYATCRLCGRQVSRGPGVNVGTTALWKHLK
SMHREELEKSGHGQAGQRQDPRPHGPQLPTGIEGNWGRLLEQVGTMALWASQREKEVL
RRERAVEWRERAVEKRERALEEVERAILEMKWKVRAEKEACQREKELPAAVHPFHFV"
BASE COUNT 407 a 283 c 400 g 330 t
ORIGIN
1 cccaaatata tatttaatct tgtggttcaa ataagctttt ggctcacatc taagcacatc
61 ataaagaacg ctgtagaaga ggtgacatga tgaggcggga agacgaggaa gaggagggaa
121 caatgatgaa ggcaaaaggg gacttagaga tgaaggagga ggaagagatt agtgagacag
181 gagaactggt tggccctttt gtgagtgcta tgcccactcc aatgccccac aacaagggca
241 cccggttctc tgaggcatgg gaatatttcc acctagctcc tgctcgtgct gggcaccatc
301 ccaaccagta tgccacctgc cgcctgtgtg gcaggcaggt gagccgtggc cctggggtca
361 acgtgggcac cactgcactg tggaagcatc tgaaaagcat gcacagagag gagctggaga
421 agagtggcca tggtcaggct gggcagcgcc aggatccaag gccccacggg ccccagctcc
481 ccacaggcat tgagggtaac tggggtaggc tcctggagca ggtgggcacc atggctttgt
541 gggccagcca aagggaaaag gaggtgctta ggagggaaag ggcagtggaa tggcgggaga
601 gggctgtgga aaaaagggag cgagccctgg aggaggtgga aagggccatc ctggagatga
661 agtggaaggt gagggctgag aaggaggcat gccagcggga gaaagagctg cctgcagcag
721 tacatccctt ccattttgtt taaattgggc ttggagaatc tattctgaaa acattgactc
781 tagacttgta gaaaagagcc attttagttt caactcaaat gtaaagcaaa gtagtttggt
841 gacattttgc ttttatgtga aatagtgcac agtatgagtt aatctgagca ggtctgaatt
901 gaccaaatgc ttatctacga ggttcctaga gctctgctga cccttggccg aaactctaaa
961 atgtacctat taaagataaa tgcttctacc aaagtaaaac tctgtgagtt gtttcagggc
1021 agaatgtacc agccagtcag cgttgtttaa caaaataatc agatttttgc ctagcactcg
1081 gttttggtgg agctgacgat tttgagggct gaggctggtt aggtagctgg aatgtgccta
1141 tgtgaccagc tcacttgcag acaccctgcc ggaagcagag cttaatcttc ctaggactga
1201 ggtcttagca catgtactgg tggagtttcc agaccaccag tatgaataaa agcttgttct
1261 gtgtgaccca gcaagtggaa ggacaaagaa ctgtgagcct cagatctttg gacctttcca
1321 atgcgtctct ttctcctgtt attgctgcaa tgtattttct tgcttatatt aaagttgttt
1381 catcagtaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
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