LOCUS BC003513 582 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens chemokine (C-X-C motif) ligand 14, mRNA (cDNA clone
MGC:10687 IMAGE:3611714), complete cds.
ACCESSION BC003513
VERSION BC003513.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 582)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 582)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (20-FEB-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 13 Row: m Column: 21
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 23199988.
FEATURES Location/Qualifiers
source 1..582
/db_xref="H-InvDB:HIT000031569"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:10687 IMAGE:3611714"
/tissue_type="Pancreas, adenocarcinoma"
/clone_lib="NIH_MGC_39"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..582
/gene="CXCL14"
/gene_synonym="BMAC"
/gene_synonym="bolekine"
/gene_synonym="BRAK"
/gene_synonym="Kec"
/gene_synonym="KS1"
/gene_synonym="MGC10687"
/gene_synonym="MIP-2g"
/gene_synonym="NJAC"
/db_xref="GeneID:9547"
/db_xref="HGNC:HGNC:10640"
/db_xref="MIM:604186"
CDS 159..494
/gene="CXCL14"
/gene_synonym="BMAC"
/gene_synonym="bolekine"
/gene_synonym="BRAK"
/gene_synonym="Kec"
/gene_synonym="KS1"
/gene_synonym="MGC10687"
/gene_synonym="MIP-2g"
/gene_synonym="NJAC"
/codon_start=1
/product="chemokine (C-X-C motif) ligand 14"
/protein_id="AAH03513.1"
/db_xref="GeneID:9547"
/db_xref="HGNC:HGNC:10640"
/db_xref="MIM:604186"
/translation="MSLLPRRAPPVSMRLLAAALLLLLLALYTARVDGSKCKCSRKGP
KIRYSDVKKLEMKPKYPHCEEKMVIITTKSVSRYRGQEHCLHPKLQSTKRFIKWYNAW
NEKRRVYEE"
BASE COUNT 155 a 179 c 176 g 72 t
ORIGIN
1 aagcgcagag cgcagcgcac ggccacagac agccctgggc atccaccgac ggcgcagccg
61 gagccagcag agccggaagg cgcgccccgg gcagagaaag ccgagcagag ctgggtggcg
121 tctccgggcc gccgctccga cgggccagcg ccctccccat gtccctgctc ccacgccgcg
181 cccctccggt cagcatgagg ctcctggcgg ccgcgctgct cctgctgctg ctggcgctgt
241 acaccgcgcg tgtggacggg tccaaatgca agtgctcccg gaagggaccc aagatccgct
301 acagcgacgt gaagaagctg gaaatgaagc caaagtaccc gcactgcgag gagaagatgg
361 ttatcatcac caccaagagc gtgtccaggt accgaggtca ggagcactgc ctgcacccca
421 agctgcagag caccaagcgc ttcatcaagt ggtacaacgc ctggaacgag aagcgcaggg
481 tctacgaaga atagggtgaa aaacctcaga agggaaaact ccaaaccagt tgggagactt
541 gtgcaaagga ctttgcagat taaaaaaaaa aaaaaaaaaa aa
//