LOCUS BC003407 2754 bp mRNA linear HUM 06-JUN-2005 DEFINITION Homo sapiens leucine rich repeat containing 40, mRNA (cDNA clone IMAGE:3450292), partial cds. ACCESSION BC003407 VERSION BC003407.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2754) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2754) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (20-FEB-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 3 Row: f Column: 14. FEATURES Location/Qualifiers source 1..2754 /db_xref="H-InvDB:HIT000031550" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:3450292" /tissue_type="Placenta, choriocarcinoma" /clone_lib="NIH_MGC_10" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene <1..2754 /gene="LRRC40" /gene_synonym="dJ677H15.1" /gene_synonym="FLJ20331" /db_xref="GeneID:55631" CDS <1..1747 /gene="LRRC40" /gene_synonym="dJ677H15.1" /gene_synonym="FLJ20331" /codon_start=2 /product="LRRC40 protein" /protein_id="AAH03407.2" /db_xref="GeneID:55631" /translation="DCGTSVPQGLLKAARKSGQLNLSGRNLSEVPQCVWRINVDIPEE ANQNLSFGATERWWEQTDLTKLIISNNKLQSLTDDLRLLPALTVLDIHDNQLTSLPSA IRELENLQKLNVSHNKLKILPEEITNLRNLKCLYLQHNELTCISEGFEQLSNLEDLDL SNNHLTTVPASFSSLSSLVRLNLSSNELKSLPAEINRMKRLKHLDCNSNLLETIPPEL AGMESLELLYLRRNKLRFLPEFPSCSLLKELHVGENQIEMLEAEHLKHLNSILVLDLR DNKLKSVPDEIILLRSLERLDLSNNDISSLPYSLGNLHLKFLALEGNPLRTIRREIIS KGTQEVLKYLRSKIKDDGPSQSESATETAMTLPSESRVNIHAIITLKILDYSDKQATL IPDEVFDAVKSNIVTSINFSKNQLCEIPKRMVELKEMVSDVDLSFNKLSFISLELCVL QKLTFLDLRNNFLNSLPEEMESLVRLQTINLSFNRFKMLPEVLYRIFTLETILISNNQ VGSVDPQKMKMMENLTTLDLQNNDLLQIPPELGNCVNLRTLLLDGNPFRVPRAAILMK GTAAILEYLRDRIPT" BASE COUNT 931 a 449 c 475 g 899 t ORIGIN 1 agactgcggt acctcggtac cccaagggct gttgaaggca gcgaggaaga gcggccagtt 61 aaacctgtcg ggtagaaacc tcagtgaagt gccgcagtgt gtctggagaa taaatgtgga 121 tatccctgag gaagctaatc agaatctttc gtttggtgct actgaaagat ggtgggagca 181 gacagatttg accaaactaa taatatcaaa caataaactt cagtcactta cagatgacct 241 gcgactcttg cctgcactga ctgttcttga tatacatgat aatcagttga catcccttcc 301 ttctgctata agagagctag aaaatcttca gaaacttaat gtcagccata ataaactgaa 361 aatactccct gaagaaatta caaacctaag aaacctgaag tgcctgtatc tccagcataa 421 tgaattaacc tgcatatcag agggatttga acaactttcc aatttagaag atttagatct 481 ttcaaacaat catcttacaa ctgttcctgc tagtttttct tctctgtcca gtctggtgcg 541 actcaatctt tctagtaatg aactgaagag tttgccagca gaaataaata gaatgaaaag 601 gttgaagcat ttggattgta attcaaatct cttggaaact atacctcctg aattggctgg 661 catggaatca ctagaattgc tttatttgcg gaggaataaa ttacgttttc taccagaatt 721 tccttcttgt agtctattga aggaattgca cgtaggtgaa aaccagattg aaatgttaga 781 ggcagaacat cttaaacatc tgaattcaat tcttgtgcta gacctgaggg ataacaagtt 841 aaaatctgtt ccagatgaaa ttatactact acggtccttg gaaaggcttg acctaagcaa 901 caatgatatt agtagtcttc cctattcatt ggggaacctt catttgaaat ttttggcatt 961 agaaggaaat cctttgagaa caattcgaag agaaattata agtaaaggaa cacaagaagt 1021 cctaaaatat ctacgaagca agatcaaaga tgatggacct agccaaagtg agtctgctac 1081 tgagactgcc atgacactac caagtgaatc cagagtcaat atacatgcca tcattacatt 1141 aaaaatatta gactatagtg ataaacaagc aactttgatt cctgatgagg tgtttgatgc 1201 agtaaaaagc aacatcgtca cttctattaa cttcagtaag aatcaactat gtgaaattcc 1261 aaaaaggatg gtagaactga aggaaatggt ttctgatgtc gatctcagtt ttaataaact 1321 ttcctttata tccttggagt tatgtgtgct tcagaaattg acttttttag atctcaggaa 1381 caatttttta aattctttgc cagaagaaat ggaatcactg gtaagactgc aaacgatcaa 1441 tctttccttt aataggttta aaatgctacc tgaagttcta tatcgtatct tcacacttga 1501 aacaattctg attagtaata atcaggttgg atctgtggac cctcagaaaa tgaagatgat 1561 ggaaaatctg accacgttgg accttcaaaa taatgacctc ttacaaattc caccagagct 1621 cggtaattgt gtaaacttaa gaacattact actggatgga aatccattcc gagttcctcg 1681 agcagccata ttaatgaaag gaacagctgc tatacttgaa tatttgagag accgaattcc 1741 tacttaacat ggagttgctt tataaccctt gtcatgtatt attaaccctg gttaattcta 1801 aggaggatgt aacatttgtt ttagtatcat cttaaaaggt gattattgta attgatcttg 1861 tagtttccca gtatcaccta cctgttggta taattagcct gggccatatt cactgccagt 1921 aaatattttt acatttttat ttaagatttt tgtaaggtgt tgtatacatt tgtaatggtg 1981 ataaccacaa tgtgttcata catttgttct aaatgttttg cttatgattt atcctgctaa 2041 ctttcatttt cttatagcaa gcagtttttt caaaaatgaa tttttattta atgtggttca 2101 gtattataat aacaaagcat ttttgtagaa ctggtttttt ttctcattta tttttgtatt 2161 ccatacaatg tgaccaattg acttgaatat gactagccag tttctatgtt tttgttagat 2221 ataaaattaa atcgaatttt gttgaatact gttctttggc atttaaaaaa taagaccttc 2281 ttatcttggg ccacatgtca aaagaaaaag gaaacaaaaa tatattaaaa ataagacttt 2341 tcattaccca tgataggact tttgtgatat ggctaatctc agtacacatt tcaacttaaa 2401 acctttttat ttacagcacc ataattttaa aatttacttg caatcttggt aagactaaac 2461 ttgcagtgtt tttctaaaag ggaatttgat aggtaaactt gatttaataa aaattaaata 2521 tcatttttgt ttacaccaaa attatcagaa gtaggttgat tagtcattat aacacttacc 2581 atatgattct attaagaagt caattcagta gcatgtatat caatttatat agataggtag 2641 atagcttttg gatgattgag gcatgcttat attatgaaaa aaattgctaa taaagataaa 2701 tactacatgt tcagaataaa agttacattt ttcaaaaaaa aaaaaaaaaa aaaa //