LOCUS BC003396 891 bp mRNA linear HUM 11-SEP-2007
DEFINITION Homo sapiens structural maintenance of chromosomes 2, mRNA (cDNA
clone IMAGE:3448562), partial cds.
ACCESSION BC003396
VERSION BC003396.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 891)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 891)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (20-FEB-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 3 Row: k Column: 24
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 5453590.
FEATURES Location/Qualifiers
source 1..891
/db_xref="H-InvDB:HIT000086231"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3448562"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_10"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..>891
/gene="SMC2"
/gene_synonym="CAP-E"
/gene_synonym="CAPE"
/gene_synonym="hCAP-E"
/db_xref="GeneID:10592"
/db_xref="HGNC:HGNC:14011"
/db_xref="MIM:605576"
CDS 24..>891
/gene="SMC2"
/gene_synonym="CAP-E"
/gene_synonym="CAPE"
/gene_synonym="hCAP-E"
/codon_start=1
/product="SMC2 protein"
/protein_id="AAH03396.1"
/db_xref="GeneID:10592"
/db_xref="HGNC:HGNC:14011"
/db_xref="MIM:605576"
/translation="MHIKSIILEGFKSYAQRTEVNGFDPLFNAITGLNGSGKSNILDS
ICFLLGISNLSQVRASNLQDLVYKNGQAGITKASVSITFDNSDKKQSPLGFEVHDEIT
VTRQVVIGGRNKYLINGVNANNTRVQDLFCSVGLNVNNPHFLIMQGRITKVLNMKPPE
ILSMIEEAAGTRMYEYKKIAAQKTIEKKEAKLKEIKTILEEEITPTIQKLKEERSSYL
EYQKVMREIEHLSRLYIAYQFLLAEDTKVRSAEELKEMQDKVIKLQEELSENDKKIKA
LNHEIEELEKKKK"
BASE COUNT 333 a 148 c 176 g 234 t
ORIGIN
1 gctgacccaa gacagtatcg aaaatgcata ttaagtcaat tattctagag ggattcaagt
61 cctatgctca gaggaccgaa gtcaatggtt ttgaccccct cttcaatgct atcactggct
121 taaatggtag tgggaaatcc aacatattgg actccatctg ctttttgctg ggcatctcca
181 acctgtctca ggttcgggct tctaatttac aagatttagt ttacaaaaat gggcaggctg
241 gtattaccaa agcctctgtg tcaatcactt ttgataattc tgacaaaaag caaagtcctt
301 taggatttga ggttcatgat gaaatcacag taacaaggca ggtggttatt ggtggtagaa
361 ataaatattt aatcaatgga gtcaatgcca acaacaccag agtacaggat ctcttctgtt
421 ctgttggcct taatgttaac aaccctcact ttctcatcat gcagggccga attacaaaag
481 tattgaatat gaaacctcca gagattttat ccatgataga agaagcagct ggaaccagga
541 tgtatgaata caaaaaaata gctgcacaga aaactataga aaaaaaggag gctaagctga
601 aagaaattaa gacgatactt gaagaagaga ttactccaac cattcaaaaa ttaaaagagg
661 aaagatcgtc ctacttggag taccaaaaag taatgagaga aatagaacat ttgagtcgtt
721 tatatattgc ttatcagttt ttgctggctg aagataccaa agtacgctca gctgaggaat
781 taaaagaaat gcaagataaa gttataaagc ttcaggaaga attgtctgag aatgataaaa
841 aaataaaagc acttaatcat gaaatagaag aattggaaaa aaaaaaaaaa a
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