LOCUS BC003390 1243 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens proteasome maturation protein, mRNA (cDNA clone
MGC:4885 IMAGE:3446986), complete cds.
ACCESSION BC003390
VERSION BC003390.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1243)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1243)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (20-FEB-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 3 Row: a Column: 12
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21361533.
FEATURES Location/Qualifiers
source 1..1243
/db_xref="H-InvDB:HIT000031540"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:4885 IMAGE:3446986"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_10"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1243
/gene="POMP"
/gene_synonym="HSPC014"
/gene_synonym="PNAS-110"
/gene_synonym="UMP1"
/db_xref="GeneID:51371"
/db_xref="HGNC:HGNC:20330"
CDS 45..470
/gene="POMP"
/gene_synonym="HSPC014"
/gene_synonym="PNAS-110"
/gene_synonym="UMP1"
/codon_start=1
/product="proteasome maturation protein"
/protein_id="AAH03390.1"
/db_xref="GeneID:51371"
/db_xref="HGNC:HGNC:20330"
/translation="MNARGLGSELKDSIPVTELSASGPFESHDLLRKGFSCVKNELLP
SHPLELSEKNFQLNQDKMNFSTLRNIQGLFAPLKLQMEFKAVQQVQRLPFLSSSNLSL
DVLRGNDETIGFEDILNDPSQSEVMGEPHLMVEYKLGLL"
BASE COUNT 405 a 179 c 231 g 428 t
ORIGIN
1 ctgacggtaa cggggcagag aggctgttcg cagagctgcg gaagatgaat gccagaggac
61 ttggatctga gctaaaggac agtattccag ttactgaact ttcagcaagt ggaccttttg
121 aaagtcatga tcttcttcgg aaaggttttt cttgtgtgaa aaatgaactt ttgcctagtc
181 atccccttga attatcagaa aaaaatttcc agctcaacca agataaaatg aatttttcca
241 cactgagaaa cattcagggt ctatttgctc cgctaaaatt acagatggaa ttcaaggcag
301 tgcagcaggt tcagcgtctt ccatttcttt caagctcaaa tctttcactg gatgttttga
361 ggggtaatga tgagactatt ggatttgagg atattcttaa tgatccatca caaagcgaag
421 tcatgggaga gccacacttg atggtggaat ataaacttgg tttactgtaa tagtgtgctg
481 ttcatggaaa ccgagggctg catcttgttt atagtcatct ttgtactgta atttgatgta
541 cacaacatta aaagtactga cacctgagaa tttctgctca agtagtatca gtgatcattt
601 aaaatttgga ggggtctttg gtttacagcc atgtgacaat taaaagcact aaagggagat
661 catgttaaag ctcttaattt atattaaaac agtagccttt gtctttaaaa aagttgttgc
721 tcatgaatat tataaaatga tctacaggtt tcaattcaac ctgtttctag gtttttttgt
781 aaatttagtt ttgattaagc attataagca tttgagtcta taaactttat agtagcatct
841 ttcagaataa acatttttaa ttgatttcag tggcaactct caaattgatt acaatatgag
901 atatatcagt gtcgtccatt aacactcata agaataatat ttactgtgtc agtgctattt
961 taggattata gttattgttt gattatttca ggttgaaaag tagaagttcc aaggttttga
1021 ttttggtctg gtctttaagt gaaaaattaa agcaaccagt agatgtaggt taaactttta
1081 cttcatagac ttaatatgta attaatatat tgccaagcaa cactgttaaa gaaaagtaaa
1141 actcattttt tcttgttctt aatttatata ttacaagata ctgtaaggta ttctttatga
1201 agttgatata taaaaattta catttttaaa aaaaaaaaaa aaa
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