LOCUS BC003388 582 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens TRAF family member-associated NFKB activator, mRNA (cDNA clone IMAGE:3446546), complete cds. ACCESSION BC003388 VERSION BC003388.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 582) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 582) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (20-FEB-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 3 Row: m Column: 8 This clone has the following problem: The cds is short compared to the longest cds in the locus. FEATURES Location/Qualifiers source 1..582 /db_xref="H-InvDB:HIT000031538" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:3446546" /tissue_type="Placenta, choriocarcinoma" /clone_lib="NIH_MGC_10" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..582 /gene="TANK" /gene_synonym="I-TRAF" /db_xref="GeneID:10010" /db_xref="HGNC:HGNC:11562" /db_xref="MIM:603893" CDS 43..402 /gene="TANK" /gene_synonym="I-TRAF" /codon_start=1 /product="TRAF family member-associated NFKB activator" /protein_id="AAH03388.1" /db_xref="GeneID:10010" /db_xref="HGNC:HGNC:11562" /db_xref="MIM:603893" /translation="MDKNIGEQLNKAYEAFRQACMDRDSAVKELQQKTENYEQRIREQ QEQLSLQQTIIDKLKSQLLLVNSTQDNNYGCVPLLEDSETRKNNLTLDQPQDKVISGI AREKLPKVDIASAESSI" BASE COUNT 229 a 94 c 108 g 151 t ORIGIN 1 atttactcca tcctttatag tgatgctaca ggacgaagag gaatggataa aaacattggc 61 gagcaactca ataaagcgta tgaagccttc cggcaggcat gcatggatag agattctgca 121 gtaaaagaat tacagcaaaa gactgagaac tatgagcaga gaatacgtga acaacaggaa 181 cagctgtcac ttcaacagac tattattgac aagctaaaat ctcagttact tcttgtgaat 241 tccactcaag ataacaatta tggctgtgtt cctctgcttg aagacagtga aacaagaaag 301 aataatttga ctcttgatca gccacaagat aaagtgattt caggaatagc aagagaaaaa 361 ctaccaaagg tagacattgc ttctgcagaa agcagcattt aaatgctgat gcgtgacata 421 gcttcctcat tttatttttc tgaagtgatc tgctggaatt ccaaacagaa gttccatata 481 tacaaatatg tggcttaaat atttctaaat agaagaacta ttttcaagta aaataaaggc 541 tgaggttttg tatttaaaaa aaaaaaaaaa aaaaaaaaaa aa //