LOCUS BC003178 1844 bp mRNA linear HUM 28-SEP-2006
DEFINITION Homo sapiens mutY homolog (E. coli), mRNA (cDNA clone MGC:4416
IMAGE:2958002), complete cds.
ACCESSION BC003178
VERSION BC003178.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1844)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1844)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (13-FEB-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 9 Row: p Column: 12
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 6912519.
FEATURES Location/Qualifiers
source 1..1844
/db_xref="H-InvDB:HIT000031492"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:4416 IMAGE:2958002"
/tissue_type="Kidney, renal cell adenocarcinoma"
/clone_lib="NIH_MGC_14"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1844
/gene="MUTYH"
/gene_synonym="MGC4416"
/gene_synonym="MYH"
/db_xref="GeneID:4595"
/db_xref="HGNC:HGNC:7527"
/db_xref="MIM:604933"
CDS 155..1762
/gene="MUTYH"
/gene_synonym="MGC4416"
/gene_synonym="MYH"
/codon_start=1
/product="mutY homolog (E. coli)"
/protein_id="AAH03178.1"
/db_xref="GeneID:4595"
/db_xref="HGNC:HGNC:7527"
/db_xref="MIM:604933"
/translation="MTPLVSRLSRLWAIMRKPRAAVGSGHRKQAASQEGRQKHAKNNS
QAKPSACDGLARQPEEVVLQASVSSYHLFRDVAEVTAFRGSLLSWYDQEKRDLPWRRR
AEDEMDLDRRAYAVWVSEVMLQQTQVATVINYYTGWMQKWPTLQDLASASLEEVNQLW
AGLGYYSRGRRLQEGARKVVEELGGHMPRTAETLQQLLPGVGRYTAGAIASIAFGQAT
GVVDGNVARVLCRVRAIGADPSSTLVSQQLWGLAQQLVDPARPGDFNQAAMELGATVC
TPQRPLCSQCPVESLCRARQRVEQEQLLASGSLSGSPDVEECAPNTGQCHLCLPPSEP
WDQTLGVVNFPRKASRKPPREESSATCVLEQPGALGAQILLVQRPNSGLLAGLWEFPS
VTWEPSEQLQRKALLQELQRWAGPLPATHLRHLGEVVHTFSHIKLTYQVYGLALEGQT
PVTTVPPGARWLTQEEFHTAAVSTAMKKVFRVYQGQQPGTCMGSKRSQVSSPCSRKKP
RMGQQVLDNFFRSHISTDAHSLNSAAQ"
BASE COUNT 400 a 543 c 560 g 341 t
ORIGIN
1 agcagtcctc tgaagcttga ggagcctcta gaactatgag cccgaggcct tcccctctcc
61 cagagcgcag aggctttgaa ggctacctct gggaagccgc tcaccgtcgg aagctgcggg
121 agctgaaact gcgccatcgt cactgtcggc ggccatgaca ccgctcgtct cccgcctgag
181 tcgtctgtgg gccatcatga ggaagccacg agcagccgtg ggaagtggtc acaggaagca
241 ggcagccagc caggaaggga ggcagaagca tgctaagaac aacagtcagg ccaagccttc
301 tgcctgtgat ggcctggcca ggcagccgga agaggtggta ttgcaggcct ctgtctcctc
361 ataccatcta ttcagagacg tagctgaagt cacagccttc cgagggagcc tgctaagctg
421 gtacgaccaa gagaaacggg acctaccatg gagaagacgg gcagaagatg agatggacct
481 ggacaggcgg gcatatgctg tgtgggtctc agaggtcatg ctgcagcaga cccaggttgc
541 cactgtgatc aactactata ccggatggat gcagaagtgg cctacactgc aggacctggc
601 cagtgcttcc ctggaggagg tgaatcaact ctgggctggc ctgggctact attctcgtgg
661 ccggcggctg caggagggag ctcggaaggt ggtagaggag ctagggggcc acatgccacg
721 tacagcagag accctgcagc agctcctgcc tggcgtgggg cgctacacag ctggggccat
781 tgcctctatc gcctttggcc aggcaaccgg tgtggtggat ggcaacgtag cacgggtgct
841 gtgccgtgtc cgagccattg gtgctgatcc cagcagcacc cttgtttccc agcagctctg
901 gggtctagcc cagcagctgg tggacccagc ccggccagga gatttcaacc aagcagccat
961 ggagctaggg gccacagtgt gtaccccaca gcgcccactg tgcagccagt gccctgtgga
1021 gagcctgtgc cgggcacgcc agagagtgga gcaggaacag ctcttagcct cagggagcct
1081 gtcgggcagt cctgacgtgg aggagtgtgc tcccaacact ggacagtgcc acctgtgcct
1141 gcctccctcg gagccctggg accagaccct gggagtggtc aacttcccca gaaaggccag
1201 ccgcaagccc cccagggagg agagctctgc cacctgtgtt ctggaacagc ctggggccct
1261 tggggcccaa attctgctgg tgcagaggcc caactcaggt ctgctggcag gactgtggga
1321 gttcccgtcc gtgacctggg agccctcaga gcagcttcag cgcaaggccc tgctgcagga
1381 actacagcgt tgggctgggc ccctcccagc cacgcacctc cggcaccttg gggaggttgt
1441 ccacaccttc tctcacatca agctgacata tcaagtatat gggctggcct tggaagggca
1501 gaccccagtg accaccgtac caccaggtgc tcgctggctg acgcaggagg aatttcacac
1561 cgcagctgtt tccaccgcca tgaaaaaggt tttccgtgtg tatcagggcc aacagccagg
1621 gacctgtatg ggttccaaaa ggtcccaggt gtcctctccg tgcagtcgga aaaagccccg
1681 catgggccag caagtcctgg ataatttctt tcggtctcac atctccactg atgcacacag
1741 cctcaacagt gcagcccagt gacacctctg aaagccccca ttccctgaga atcctgttgt
1801 tagtaaagtg cttatttttg tagttaaaaa aaaaaaaaaa aaaa
//