LOCUS BC003175 3022 bp mRNA linear HUM 18-MAR-2009 DEFINITION Homo sapiens N-myc downstream regulated 1, mRNA (cDNA clone MGC:4412 IMAGE:2957847), complete cds. ACCESSION BC003175 VERSION BC003175.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3022) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3022) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (13-FEB-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: DCTD/DTP cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 9 Row: h Column: 16 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 37655182. FEATURES Location/Qualifiers source 1..3022 /db_xref="H-InvDB:HIT000031489" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:4412 IMAGE:2957847" /tissue_type="Kidney, renal cell adenocarcinoma" /clone_lib="NIH_MGC_14" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..3022 /gene="NDRG1" /gene_synonym="CMT4D" /gene_synonym="DRG1" /gene_synonym="GC4" /gene_synonym="HMSNL" /gene_synonym="NDR1" /gene_synonym="NMSL" /gene_synonym="PROXY1" /gene_synonym="RIT42" /gene_synonym="RTP" /gene_synonym="TARG1" /gene_synonym="TDD5" /db_xref="GeneID:10397" /db_xref="HGNC:HGNC:7679" /db_xref="MIM:605262" CDS 118..1302 /gene="NDRG1" /gene_synonym="CMT4D" /gene_synonym="DRG1" /gene_synonym="GC4" /gene_synonym="HMSNL" /gene_synonym="NDR1" /gene_synonym="NMSL" /gene_synonym="PROXY1" /gene_synonym="RIT42" /gene_synonym="RTP" /gene_synonym="TARG1" /gene_synonym="TDD5" /codon_start=1 /product="N-myc downstream regulated 1" /protein_id="AAH03175.1" /db_xref="GeneID:10397" /db_xref="HGNC:HGNC:7679" /db_xref="MIM:605262" /translation="MSREMQDVDLAEVKPLVEKGETITGLLQEFDVQEQDIETLHGSV HVTLCGTPKGNRPVILTYHDIGMNHKTCYNPLFNYEDMQEITQHFAVCHVDAPGQQDG AASFPAGYMYPSMDQLAEMLPGVLQQFGLKSIIGMGTGAGAYILTRFALNNPEMVEGL VLINVNPCAEGWMDWAASKISGWTQALPDMVVSHLFGKEEMQSNVEVVHTYRQHIVND MNPGNLHLFINAYNSRRDLEIERPMPGTHTVTLQCPALLVVGDSSPAVDAVVECNSKL DPTKTTLLKMADCGGLPQISQPAKLAEAFKYFVQGMGYMPSASMTRLMRSRTASGSSV TSLDGTRSRSHTSEGTRSRSHTSEGTRSRSHTSEGAHLDITPNSGAAGNSAGPKSMEV SC" BASE COUNT 681 a 840 c 807 g 694 t ORIGIN 1 ctggtgctga agctcgtcag ttcaccatcc gccctcggct tccgcggggc gctgggccgc 61 cagcctcggc accgtccttt cctttctccc tcgcgttagg caggtgacag cagggacatg 121 tctcgggaga tgcaggatgt agacctcgct gaggtgaagc ctttggtgga gaaaggggag 181 accatcaccg gcctcctgca agagtttgat gtccaggagc aggacatcga gactttacat 241 ggctctgttc acgtcacgct gtgtgggact cccaagggaa accggcctgt catcctcacc 301 taccatgaca tcggcatgaa ccacaaaacc tgctacaacc ccctcttcaa ctacgaggac 361 atgcaggaga tcacccagca ctttgccgtc tgccacgtgg acgcccctgg ccagcaggac 421 ggcgcagcct ccttccccgc agggtacatg tacccctcca tggatcagct ggctgaaatg 481 cttcctggag tccttcaaca gtttgggctg aaaagcatta ttggcatggg aacaggagca 541 ggcgcctaca tcctaactcg atttgctcta aacaaccctg agatggtgga gggccttgtc 601 cttatcaacg tgaacccttg tgcggaaggc tggatggact gggccgcctc caagatctca 661 ggatggaccc aagctctgcc ggacatggtg gtgtcccacc tttttgggaa ggaagaaatg 721 cagagtaacg tggaagtggt ccacacctac cgccagcaca ttgtgaatga catgaacccc 781 ggcaacctgc acctgttcat caatgcctac aacagccggc gcgacctgga gattgagcga 841 ccaatgccgg gaacccacac agtcaccctg cagtgccctg ctctgttggt ggttggggac 901 agctcgcctg cagtggatgc cgtggtggag tgcaactcaa aattggaccc aacaaagacc 961 actctcctca agatggcgga ctgtggcggc ctcccgcaga tctcccagcc ggccaagctc 1021 gctgaggcct tcaagtactt cgtgcagggc atgggataca tgccctcggc tagcatgacc 1081 cgcctgatgc ggtcccgcac agcctctggt tccagcgtca cttctctgga tggcacccgc 1141 agccgctccc acaccagcga gggcacccga agccgctccc acaccagcga gggcacccgc 1201 agccgctcgc acaccagcga gggggcccac ctggacatca cccccaactc gggtgctgct 1261 gggaacagcg ccgggcccaa gtccatggag gtctcctgct aggcggcctg cccagctgcc 1321 gcccccggac tctgatctct gtagtggccc cctcctcccc ggcccctttt cgccccctgc 1381 ctgccatact gcgcctaact cggtattaat ccaaagctta ttttgtaaga gtgagctctg 1441 gtggagacaa atgaggtcta ttacgtgggt gccctctcca aaggcggggt ggcggtggac 1501 caaaggaagg aagcaagcat ctccgcatcg catcctcttc cattaaccag tggccggttg 1561 ccactctcct cccctccctc agagacacca aactgccaaa aacaagacgc gtagcagcac 1621 acacttcaca aagccaagcc taggccgccc tgagcatcct ggttcaaacg ggtgcctggt 1681 cagaaggcca gccgcccact tcccgtttcc tctttaactg aggagaagct gatccagttt 1741 ccggaaacaa aatccttttc tcatttgggg aggggggtaa tagtgacatg caggcacctc 1801 ttttaaacag gcaaaacagg aagggggaaa aggtgggatt catgtcgagg ctagaggcat 1861 ttggaacaac aaatctacgt agttaacttg aagaaaccga tttttaaagt tggtgcatct 1921 agaaagcttt gaatgcagaa gcaaacaagc ttgatttttc tagcatcctc ttaatgtgca 1981 gcaaaagcag gcaacaaaat ctcctggctt tacagacaaa aatatttcag caaacgttgg 2041 gcatcatggt ttttgaaggc tttagttctg ctttctgcct ctcctccaca gccccaacct 2101 cccacccctg atacatgagc cagtgattat tcttgttcag ggagaagatc atttagattt 2161 gttttgcatt ccttagaatg gagggcaaca ttccacagct gccctggctg tgatgagtgt 2221 ccttgcaggg gccggagtag gagcactggg gtgggggcgg aattggggtt actcgatgta 2281 agggattcct tgttgttgtg ttgagatcca gtgcagttgt gatttctgtg gatcccagct 2341 tggttccagg aattttgtgt gattggctta aatccagttt tcaatcttcg acagctgggc 2401 tggaacgtga actcagtagc tgaacctgtc tgacccggtc acgttcttgg atcctcagaa 2461 ctcttgctct tgtcggggtg ggggtgggaa ctcacgtggg gagcggtggc tgagaaaatg 2521 taaggattct ggaatacata ttccatggga ctttccttcc ctctcctgct tcctcttttc 2581 ctgctcccta acctttcgcc gaatggggca gcaccactga cgtttctggg cggccagtgc 2641 ggctgccagg ttcctgtact actgccttgt acttttcatt ttggctcacc gtggattttc 2701 tcataggaag tttggtcaga gtgaattgaa tattgtaagt cagccactgg gacccgagga 2761 tttctgggac cccgcagttg ggaggaggaa gtagtccagc cttccaggtg gcgtgagagg 2821 caatgactcg ttacctgccg cccatcacct tggaggcctt ccctggcctt gagtagaaaa 2881 gtcggggatc ggggcaagag aggctgagta cggatgggaa actattgtgc acaagtcttt 2941 ccagaggagt ttcttaatga gatatttgta tttatttcca gaccaataaa tttgtaactt 3001 tgcaaaaaaa aaaaaaaaaa aa //