LOCUS BC003174 1499 bp mRNA linear HUM 01-FEB-2005 DEFINITION Homo sapiens core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1, mRNA (cDNA clone IMAGE:2957836), partial cds. ACCESSION BC003174 VERSION BC003174.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1499) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1499) AUTHORS Director MGC Project. TITLE Direct Submission JOURNAL Submitted (13-FEB-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: DCTD/DTP cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Steve Jones, Sarah Barber, Mabel Brown-John, Yaron Butterfield, Andy Chan, Steve S. Chand, William Chow, Alison Cloutier, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Amara Masson, Mike R. Mayo, Josh Moran, Ryan Morin, Teika Olson, Diana Palmquist, Anca Petrescu, Anna Liisa Prahbu, Parvaneh Saeedi, JR Santos, Angelique Schnerch, Ursula Skalska, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 9 Row: l Column: 10. FEATURES Location/Qualifiers source 1..1499 /db_xref="H-InvDB:HIT000086223" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:2957836" /tissue_type="Kidney, renal cell adenocarcinoma" /clone_lib="NIH_MGC_14" /lab_host="DH10B-R" /note="Vector: pOTB7" gene <1..1499 /gene="C1GALT1" /gene_synonym="C1GALT" /gene_synonym="T-synthase" /db_xref="GeneID:56913" CDS <1..859 /gene="C1GALT1" /gene_synonym="C1GALT" /gene_synonym="T-synthase" /codon_start=2 /product="C1GALT1 protein" /protein_id="AAH03174.1" /db_xref="GeneID:56913" /translation="IAENLYQKVRILCWVMTGPQNLEKKAKHVKATWAQRCNKVLFMS SEENKDFPAVGLKTKEGRDQLYWKTIKAFQYVHEHYLEDADWFLKADDDTYVILDNLR WLLSKYDPEEPIYFGRRFKPYVKQGYMSGGAGYVLSKEALKRFVDAFKTDKCTHSSSI EDLALGRCMEIMNVEAGDSRDTIGKETFHPFVPEHHLIKGYLPRTFWYWNYNYYPPVE GPGCCSDLAVSFHYVDSTTMYELEYLVYHLRPYGYLYRYQPTLPERILKEISQANKNE DTKVKLGNP" BASE COUNT 533 a 245 c 281 g 440 t ORIGIN 1 cattgctgaa aacctctatc agaaagttag aattctttgc tgggttatga ccggccctca 61 aaacctagag aaaaaggcca aacacgtcaa agctacttgg gcccagcgtt gtaacaaagt 121 gttgtttatg agttcagaag aaaataaaga cttccctgct gtgggactga aaaccaaaga 181 aggcagagat caactatact ggaaaacaat taaagctttt cagtatgttc atgaacatta 241 tttagaagat gctgattggt ttttgaaagc agatgatgac acgtatgtca tactagacaa 301 tttgaggtgg cttctttcaa aatacgaccc tgaagaaccc atttactttg ggagaagatt 361 taagccttat gtaaagcagg gctacatgag tggaggagca ggatatgtac taagcaaaga 421 agccttgaaa agatttgttg atgcatttaa aacagacaag tgtacacata gttcctccat 481 tgaagactta gcactgggga gatgcatgga aattatgaat gtagaagcag gagattccag 541 agataccatt ggaaaagaaa cttttcatcc ctttgtgcca gaacaccatt taattaaagg 601 ttatctacct agaacgtttt ggtactggaa ttacaactat tatcctcctg tagagggtcc 661 tggttgctgc tctgatcttg cagtttcttt tcactatgtt gattctacaa ccatgtatga 721 gttagaatac ctcgtttatc atcttcgtcc atatggttat ttatacagat atcaacctac 781 cttacctgaa cgtatactaa aggaaattag tcaagcaaac aaaaatgaag atacaaaagt 841 gaagttagga aatccttgaa agaaaatcat gaatgaacaa aggtaatatg tctagcactg 901 cactgaaaaa ggacttctgc atttctgaca tagaacactg gaatcccagt gaggaattct 961 aagtgaacat tccttataga aacctttcac atgaatgact ataaactgaa gctttaaatg 1021 agctgtgaag tgtgttaaaa tgtgttttga tacagtaata tataaatata tctatatata 1081 tgaggaactt gtgtttttta aatggtggcc aggtagagga actagaaaag agattttgtt 1141 gcctgttttc tgaccatctg tgttattgtc actgagaaac taaaatagta aatttactaa 1201 aactacactg caccatgtta gtaataaaca gatctgcctt aaagaaaaga aaattttaga 1261 aagaaatatt gttgctcagt gttgttaata tagctcaaga attgagttta tatttgcagt 1321 atgctataaa tgataccccc ctaccacacc cacacacaca gtttttgtct aatgaaaatg 1381 ttgctgtgat tatttataat tggtagtatt tcttccagaa gaagctaaaa taagactggc 1441 acttaccctg aagtgcatta ataaaaccac actttaaaat taaaaaaaaa aaaaaaaaa //