LOCUS BC003171 2081 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens glycosylphosphatidylinositol anchor attachment protein
1 homolog (yeast), mRNA (cDNA clone MGC:4406 IMAGE:2906111),
complete cds.
ACCESSION BC003171
VERSION BC003171.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2081)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2081)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (13-FEB-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 9 Row: n Column: 8
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 6031166.
FEATURES Location/Qualifiers
source 1..2081
/db_xref="H-InvDB:HIT000031488"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:4406 IMAGE:2906111"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_20"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2081
/gene="GPAA1"
/gene_synonym="GAA1"
/gene_synonym="hGAA1"
/db_xref="GeneID:8733"
/db_xref="HGNC:HGNC:4446"
/db_xref="MIM:603048"
CDS 87..1952
/gene="GPAA1"
/gene_synonym="GAA1"
/gene_synonym="hGAA1"
/codon_start=1
/product="glycosylphosphatidylinositol anchor attachment
protein 1 homolog (yeast)"
/protein_id="AAH03171.1"
/db_xref="GeneID:8733"
/db_xref="HGNC:HGNC:4446"
/db_xref="MIM:603048"
/translation="MGLLSDPVRRRALARLVLRLNAPLCVLSYVAGIAWFLALVFPPL
TQRTYMSENAMGSTMVEEQFAGGDRARAFARDFAAHRKKSGALPVAWLERTMRSVGLE
VYTQSFSRKLPFPDETHERYMVSGTNVYGILRAPRAASTESLVLTVPCGSDSTNSQAV
GLLLALAAHFRGQIYWAKDIVFLVTEHDLLGTEAWLEAYHDVNVTGMQSSPLQGRAGA
IQAAVALELSSDVVTSLDVAVEGLNGQLPNLDLLNLFQTFCQKGGLLCTLQGKLQPED
WTSLDGPLQGLQTLLLMVLRQASGRPHGSHGLFLRYRVEALTLRGINSFRQYKYDLVA
VGKALEGMFRKLNHLLERLHQSFFLYLLPGLSRFVSIGLYMPAVGFLLLVLGLKALEL
WMQLHEAGMGLEEPGGAPGPSVPLPPSQGVGLASLVAPLLISQAMGLALYVLPVLGQH
VATQHFPVAEAEAVVLTLLAIYAAGLALPHNTHRVVSTQAPDRGWMALKLVALIYLAL
QLGCIALTNFSLGFLLATTMVPTAALAKPHGPRTLYAALLVLTSPAATLLGSLFLWRE
LQEAPLSLAEGWQLFLAALAQGVLEHHTYGALLFPLLSLGLYPCWLLFWNVLFWK"
BASE COUNT 346 a 683 c 627 g 425 t
ORIGIN
1 cccgggtctg acaggagcag cctgtgggca ccgcggcggt agttggaggc gggagagggt
61 ccgtagccgc gccgccctgc cccgccatgg gcctcctgtc ggacccggtt cgccggcgcg
121 cgctcgcccg cctagtgctg cgcctcaacg cgccgttgtg cgtgctgagc tacgtggcgg
181 gcatcgcctg gttcttggcg ctggttttcc cgccgctgac ccagcgcact tacatgtcgg
241 agaacgccat gggctccacc atggtggagg agcagtttgc gggcggagac cgtgcccggg
301 cttttgcccg ggacttcgcc gcccaccgca agaagtcggg ggctctgcca gtggcctggc
361 ttgaacggac gatgcggtca gtagggctgg aggtctacac gcagagtttc tcccggaaac
421 tgcccttccc agatgagacc cacgagcgct atatggtgtc gggcaccaac gtgtacggca
481 tcctgcgggc cccgcgtgct gccagcaccg agtcgcttgt gctcaccgtg ccctgtggct
541 ctgactctac caacagccag gctgtggggc tgctgctggc actggctgcc cacttccggg
601 ggcagattta ttgggccaaa gatatcgtct tcctggtaac agaacatgac cttctgggca
661 ctgaggcttg gcttgaagcc taccacgatg tcaatgtcac tggcatgcag tcgtctcccc
721 tgcagggccg agctggggcc attcaggcag ccgtggccct ggagctgagc agtgatgtgg
781 tcaccagcct cgatgtggcc gtggaggggc ttaacgggca gctgcccaac cttgacctgc
841 tcaatctctt ccagaccttc tgccagaaag ggggcctgtt gtgcacgctt cagggcaagc
901 tgcagcccga ggactggaca tcattggatg gaccgctgca gggcctgcag acactgctgc
961 tcatggttct gcggcaggcc tccggccgcc cccacggctc ccatggcctc ttcctgcgct
1021 accgtgtgga ggccctaacc ctgcgtggca tcaatagctt ccgccagtac aagtatgacc
1081 tggtggcagt gggcaaggct ttggagggca tgttccgcaa gctcaaccac ctcctggagc
1141 gcctgcacca gtccttcttc ctctacttgc tccccggcct ctcccgcttc gtctccatcg
1201 gcctctacat gcccgctgtc ggcttcttgc tcctggtcct tggtctcaag gctctggaac
1261 tgtggatgca gctgcatgag gctggaatgg gccttgagga gcccgggggt gcccctggcc
1321 ccagtgtacc ccttccccca tcacagggtg tggggctggc ctcgctcgtg gcacctctgc
1381 tgatctcaca ggccatggga ctggccctct atgtcctgcc agtgctgggc caacacgttg
1441 ccacccagca cttcccagtg gcagaggctg aggctgtggt gctgacactg ctggcgattt
1501 atgcagctgg cctggccctg ccccacaata cccaccgggt ggtaagcaca caggccccag
1561 acaggggctg gatggcactg aagctggtag ccctgatcta cctagcactg cagctgggct
1621 gcatcgccct caccaacttc tcactgggct tcctgctggc caccaccatg gtgcccactg
1681 ctgcgcttgc caagcctcat gggccccgga ccctctatgc tgccctgctg gtgctgacca
1741 gcccggcagc cacgctcctt ggcagcctgt tcctgtggcg ggagctgcag gaggcgccac
1801 tgtcactggc cgagggctgg cagctcttcc tggcagcgct agcccagggt gtgctggagc
1861 accacaccta cggcgccctg ctcttcccac tgctgtccct gggcctctac ccctgctggc
1921 tgcttttctg gaatgtgctc ttctggaagt gagatctgcc tgtccgggct gggacagaga
1981 ctccccaagg accccattct gcctccttct ggggaaataa atgagtgtct gtttcagcag
2041 ctaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa a
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