LOCUS BC003167 1834 bp mRNA linear HUM 11-SEP-2007
DEFINITION Homo sapiens phosphatidylinositol 4-kinase type 2 alpha, mRNA (cDNA
clone MGC:4395 IMAGE:2905670), complete cds.
ACCESSION BC003167
VERSION BC003167.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1834)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1834)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (13-FEB-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 9 Row: b Column: 2
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 19923532.
FEATURES Location/Qualifiers
source 1..1834
/db_xref="H-InvDB:HIT000031484"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:4395 IMAGE:2905670"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_20"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1834
/gene="PI4K2A"
/gene_synonym="DKFZP761G1923"
/gene_synonym="PI4KII"
/gene_synonym="PIK42A"
/gene_synonym="RP11-548K23.6"
/db_xref="GeneID:55361"
/db_xref="HGNC:HGNC:30031"
/db_xref="MIM:609763"
CDS 30..1469
/gene="PI4K2A"
/gene_synonym="DKFZP761G1923"
/gene_synonym="PI4KII"
/gene_synonym="PIK42A"
/gene_synonym="RP11-548K23.6"
/codon_start=1
/product="phosphatidylinositol 4-kinase type 2 alpha"
/protein_id="AAH03167.1"
/db_xref="GeneID:55361"
/db_xref="HGNC:HGNC:30031"
/db_xref="MIM:609763"
/translation="MDETSPLVSPERAQPPDYTFPSGSGAHFPQVPGGAVRVAAAAGS
GPSPPGSPGHDRERQPLLDRARGAAAQGQTQTVAAQAQALAAQAAAAAHAAQAHRERN
EFPEDPEFEAVVRQAELAIERCIFPERIYQGSSGSYFVKDPQGRIIAVFKPKNEEPYG
HLNPKWTKWLQKLCCPCCFGRDCLVLNQGYLSEAGASLVDQKLELNIVPRTKVVYLAS
ETFNYSAIDRVKSRGKRLALEKVPKVGQRFNRIGLPPKVGSFQLFVEGYKDADYWLRR
FEAEPLPENTNRQLLLQFERLVVLDYIIRNTDRGNDNWLIKYDCPMDSSSSRDTDWVV
VKEPVIKVAAIDNGLAFPLKHPDSWRAYPFYWAWLPQAKVPFSQEIKDLILPKISDPN
FVKDLEEDLYELFKKDPGFDRGQFHKQIAVMRGQILNLTQALKDNKSPLHLVQMPPVI
VETARSHQRSSSESYTQSFQSRKPFFSWW"
BASE COUNT 411 a 525 c 529 g 369 t
ORIGIN
1 gccgggtccc ggagccggct gtctgaggga tggacgagac gagcccacta gtgtcccccg
61 agcgggccca acccccggac tacaccttcc cgtcgggctc gggcgctcac tttccgcagg
121 tgcccggggg cgcggtccga gtggcggcgg cggccggctc gggcccctct ccgccgggct
181 cgccgggcca cgaccgcgag cggcagccac tgttggatcg ggcccggggc gcggcggccc
241 agggccagac ccaaaccgtg gcggcgcagg cccaggctct ggccgctcag gccgcggcgg
301 cagcccacgc cgctcaggcc caccgcgagc ggaacgagtt cccggaggat cctgagttcg
361 aggcggtggt gcggcaggcc gagctggcca tcgagcgctg catctttccc gagcgcatct
421 accagggctc cagcggaagc tacttcgtca aggaccctca ggggaggatc attgctgtct
481 tcaaacccaa gaatgaagag ccctatgggc atcttaatcc taagtggacc aagtggctgc
541 agaagctgtg ctgtccttgc tgctttggcc gtgactgcct tgtccttaac cagggctatc
601 tctcagaagc aggggccagc ctggtggacc aaaaactgga actcaacatt gttccccgta
661 caaaggtagt atacctggcc agtgagacct tcaactatag tgccattgac cgagtgaagt
721 ccaggggcaa gcggcttgca ctagagaaag tgccaaaagt tggacagcgg tttaaccgca
781 tcgggctacc accaaaggtt ggttcattcc agctctttgt tgaaggctac aaagatgcag
841 actattggct gcggcgtttt gaagcagaac ctcttcctga gaacactaac cggcaactac
901 tgctccagtt tgagcggttg gtggtgctgg attacatcat ccgcaacact gatcgaggca
961 atgacaactg gctgattaaa tatgactgtc caatggatag ttctagctct cgggacacag
1021 actgggtggt ggtgaaggag cctgttatca aggtggctgc catagacaat gggctggcct
1081 tcccactgaa gcatcctgac tcctggaggg catatccttt ttactgggcc tggttgcccc
1141 aggcgaaagt cccattttct caggagatca aagatctgat ccttccaaag atatcggacc
1201 ctaacttcgt caaggacttg gaagaggacc tatatgaact cttcaagaaa gatcctggtt
1261 tcgacagggg ccagttccat aagcagattg ctgtcatgcg gggccagatc ttaaatctga
1321 cccaggcctt gaaagacaac aagagtcccc tgcacctcgt ccagatgcca cctgtgattg
1381 tcgagacggc ccgttcccac cagcggtctt ctagcgagtc ctacacacag agctttcaga
1441 gccggaagcc cttcttttca tggtggtagc tccagaggca ggcagaggaa atattgtcag
1501 agactggtgg gaggaagcct ggggagtggg gtgcaggaaa agccagagaa gccggtggag
1561 agcagcacct ttaagagccc tctctctctg cttgccaccc tgctcagagc tttccaccca
1621 cagggagaag cacaatcagg aacagtgagt gctcctcgcc cttctgatgt gggggaggct
1681 ggagctccat gcacgtagtc cagatgcctg ggaaggaaca tctcccttcc agcatctgct
1741 ggtagcaggc tgggacagtc ccttccttcc ctgaaaccct gctctattgc aattccctat
1801 tatattctgc atcaaaaaaa aaaaaaaaaa aaaa
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