LOCUS BC003154 3157 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens tripartite motif-containing 32, mRNA (cDNA clone
MGC:4116 IMAGE:2906024), complete cds.
ACCESSION BC003154
VERSION BC003154.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3157)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3157)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (13-FEB-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 9 Row: f Column: 6
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 15208649.
FEATURES Location/Qualifiers
source 1..3157
/db_xref="H-InvDB:HIT000031472"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:4116 IMAGE:2906024"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_20"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..3157
/gene="TRIM32"
/gene_synonym="BBS11"
/gene_synonym="HT2A"
/gene_synonym="TATIP"
/db_xref="GeneID:22954"
/db_xref="HGNC:HGNC:16380"
/db_xref="MIM:602290"
CDS 131..2092
/gene="TRIM32"
/gene_synonym="BBS11"
/gene_synonym="HT2A"
/gene_synonym="TATIP"
/codon_start=1
/product="tripartite motif-containing 32"
/protein_id="AAH03154.1"
/db_xref="GeneID:22954"
/db_xref="HGNC:HGNC:16380"
/db_xref="MIM:602290"
/translation="MAAAAASHLNLDALREVLECPICMESFTEEQLRPKLLHCGHTIC
RQCLEKLLASSINGVRCPFCSKITRITSLTQLTDNLTVLKIIDTAGLSEAVGLLMCRS
CGRRLPRQFCRSCGLVLCEPCREADHQPPGHCTLPVKEAAEERRRDFGEKLTRLRELM
GELQRRKAALEGVSKDLQARYKAVLQEYGHEERRVQDELARSRKFFTGSLAEVEKSNS
QVVEEQSYLLNIAEVQAVSRCDYFLAKIKQADVALLEETADEEEPELTASLPRELTLQ
DVELLKVGHVGPLQIGQAVKKPRTVNVEDSWAMEATASAASTSVTFREMDMSPEEVVA
SPRASPAKQRGPEAASNIQQCLFLKKMGAKGSTPGMFNLPVSLYVTSQGEVLVADRGN
YRIQVFTRKGFLKEIRRSPSGIDSFVLSFLGADLPNLTPLSVAMNCQGLIGVTDSYDN
SLKVYTLDGHCVACHRSQLSKPWGITALPSGQFVVTDVEGGKLWCFTVDRGSGVVKYS
CLCSAVRPKFVTCDAEGTVYFTQGLGLNLENRQNEHHLEGGFSIGSVGPDGQLGRQIS
HFFSENEDFRCIAGMCVDARGDLIVADSSRKEILHFPKGGGYSVLIREGLTCPVGIAL
TPKGQLLVLDCWDHCIKIYSYHLRRYSTP"
BASE COUNT 743 a 751 c 822 g 841 t
ORIGIN
1 ggcaggcggg tgggctgccg gcggtggact cgtcggagcc gcgggcggtc aggaatttga
61 ccctctaggg catgaatact gtgctgttca gttctgagct gtgctagcaa tacccttcaa
121 aggaagagca atggctgcag cagcagcttc tcacctgaac ctggatgccc tccgggaagt
181 gctagaatgc cccatctgca tggagtcctt cacagaagag cagctgcgtc ccaagcttct
241 gcactgtggc cataccatct gccgccagtg cctggagaag ctattggcca gtagcatcaa
301 tggtgtccgc tgtccctttt gcagcaagat tacccgcata accagcttga cccagctgac
361 agacaatctg acagtgctaa agatcattga tacagctggg ctcagcgagg ctgtggggct
421 gctcatgtgt cggtcctgtg ggcggcgtct gccccggcaa ttctgccgga gctgtggttt
481 ggtgttatgt gagccctgcc gggaggcaga ccatcagcct cctggccact gtacactccc
541 tgtcaaagaa gcagctgagg agcggcgtcg ggactttgga gagaagttaa ctcgtctgcg
601 ggaacttatg ggggagctgc agcggcggaa ggcagccttg gaaggtgtct ccaaggacct
661 tcaggcaagg tataaagcag ttctccagga gtatgggcat gaggagcgca gggtccagga
721 tgagctggct cgctctcgga agttcttcac aggctctttg gctgaagttg agaagtccaa
781 tagtcaagtg gtagaggagc agagttacct gcttaacatt gcagaggtgc aggctgtgtc
841 tcgctgtgac tacttcctgg ccaagatcaa gcaggcagat gtagcactac tggaggagac
901 agctgatgag gaggagccag agctcactgc cagcttgcct cgggagctca ccctgcaaga
961 tgtggagctc cttaaggtag gtcatgttgg ccccctccaa attggacaag ctgttaagaa
1021 gccccggaca gttaacgtgg aagattcctg ggccatggag gccacagcgt ctgctgcctc
1081 tacctctgtt acttttagag agatggacat gagcccggag gaagtggttg ccagccctag
1141 ggcctcacct gctaaacagc ggggtcctga ggcagcctcc aatatccagc agtgcctctt
1201 tctcaagaag atgggggcca aaggcagcac tccaggaatg ttcaatcttc cagtcagtct
1261 ctacgtgacc agtcaaggtg aagtactagt cgctgaccgt ggtaactatc gtatacaagt
1321 ctttacccgc aaaggctttt tgaaggaaat ccgccgcagc cccagtggca ttgatagctt
1381 tgtgctaagc ttccttgggg cagatctacc caacctcact cctctctcag tggcaatgaa
1441 ctgccagggg ctgattggtg tgactgacag ctatgataac tccctcaagg tatatacctt
1501 ggatggccac tgcgtggcct gtcacaggag ccagctgagc aaaccatggg gtatcacagc
1561 cttgccatct ggccagtttg tagtaaccga tgtggaaggt ggaaagcttt ggtgtttcac
1621 agttgatcga ggatcagggg tggtcaaata cagctgccta tgtagtgctg tgcggcccaa
1681 atttgtcacc tgtgatgctg agggcaccgt ctacttcacc cagggcttag gcctcaatct
1741 ggagaatcgg cagaatgagc accacctgga gggtggcttt tccattggct ctgtaggccc
1801 tgatgggcag ctgggtcgcc agattagcca cttcttctcg gagaatgagg atttccgctg
1861 cattgctggc atgtgtgtgg atgctcgtgg tgatctcatc gtggctgaca gtagtcgcaa
1921 ggaaattctc cattttccta agggtggggg ctatagtgtc cttattcgag agggacttac
1981 ctgtccggtg ggcatagccc taactcctaa ggggcagctg ctggtcttgg actgttggga
2041 tcattgcatc aagatctaca gctaccatct gagaagatat tccaccccat aggggatgag
2101 aaattatcag tttcttctgc tcccaagcca acttcccttc ccttagttct tggttgttag
2161 tggcacatgc agaatagact cagcctatgt cctgattcca gctgggtagt tctagaactt
2221 tagaagctcc atcttttaat gtttttattt gttatgtccc cctccccgct tcccacctaa
2281 atttagagct ttaaaagatg cactgcccaa ataggacaca cgatggtgtt agctgaagtt
2341 tgattagcaa ttaggcactt ccaaggcttt agtagagaga gccactttag ccctttgtgc
2401 catgtttgaa atttgccctt gtattaaatc cttgattttt tcccatttgg ctttgatgcc
2461 cttgatccat tgtttccttc ctactataat gtgcttcatc tgtgacactt tctcttgaac
2521 tctgattgga ttcactgtgc atgcttcagt gggatctgct ccacctttca gtgacattta
2581 agacatcata ttcccgtaac attatgtctc agtctgatcg tctttaccag tatgaaagtc
2641 attcatttag tgctaccaaa ggggatacac aagcccttta ggaagcagta cctctcgcct
2701 ggaggatctg tgccatcttg gattgagaat tgcagatgtg acagaatgga ttgaccctag
2761 ttggttggta ttgatgactt cagcctggaa attgcttgcc ttttaaagaa gcatatatgg
2821 gttggaatta tgccaaagca taggaagctg ggaataagca aacaaatgct gatatagtca
2881 gcaaatttgg atagtctcta gggctcatca tttttcatac tacctctctc ttctggcctg
2941 tgtctaagga attgtacaac ataggccagg gccaacaaag tggagaggtg gacacatttt
3001 catgttcatt actaaaacaa acagcaaaac tattggtttg ttattctgtg ttttcctcaa
3061 gtcagtacat actatttggt ttcaggattt ctttccattt ctctatcaag cattaaataa
3121 ttgagaactg tttcttcaaa aaaaaaaaaa aaaaaaa
//