LOCUS BC003134 1412 bp mRNA linear HUM 17-NOV-2006
DEFINITION Homo sapiens achaete-scute complex homolog 1 (Drosophila), mRNA
(cDNA clone MGC:3624 IMAGE:2821173), complete cds.
ACCESSION BC003134
VERSION BC003134.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1412)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1412)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (13-FEB-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 9 Row: j Column: 7
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 55743093.
FEATURES Location/Qualifiers
source 1..1412
/db_xref="H-InvDB:HIT000031454"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:3624 IMAGE:2821173"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1412
/gene="ASCL1"
/gene_synonym="ASH1"
/gene_synonym="HASH1"
/gene_synonym="MASH1"
/db_xref="GeneID:429"
/db_xref="HGNC:HGNC:738"
/db_xref="MIM:100790"
CDS 554..1264
/gene="ASCL1"
/gene_synonym="ASH1"
/gene_synonym="HASH1"
/gene_synonym="MASH1"
/codon_start=1
/product="achaete-scute complex homolog 1 (Drosophila)"
/protein_id="AAH03134.1"
/db_xref="GeneID:429"
/db_xref="HGNC:HGNC:738"
/db_xref="MIM:100790"
/translation="MESSAKMESGGAGQQPQPQPQQPFLPPAACFFATAAAAAAAAAA
AAAQSAQQQQQQQQQQQQAPQLRPAADGQPSGGGHKSAPKQVKRQRSSSPELMRCKRR
LNFSGFGYSLPQQQPAAVARRNERERNRVKLVNLGFATLREHVPNGAANKKMSKVETL
RSAVEYIRALQQLLDEHDAVSAAFQAGVLSPTISPNYSNDLNSMAGSPVSSYSSDEGS
YDPLSPEEQELLDFTNWF"
BASE COUNT 315 a 441 c 426 g 230 t
ORIGIN
1 ccagggaacg tggaaggcgc accgacaggg atccggccag ggagggcgag tgaaagaagg
61 aaatcagaaa ggaagggagt taacaaaata ataaaaacag cctgagccac ggctggagag
121 accgagaccc ggcgcaagag agcgcagcct tagtaggaga ggaacgcgag acgcggcaga
181 gcgcgttcag cactgacttt tgctgctgct tctgcttttt ttttttctta gaaacaagaa
241 ggcgccagcg gcagcctcac acgcgagcgc cacgcgaggc tcccgaagcc aacccgcgaa
301 gggaggaggg gagggaggag gaggcggcgt gcagggagga gaaaaagcat tttcactttt
361 tttgctccca ctctaagaag tctcccgggg attttgtata tattttttaa cttccgtcag
421 ggctcccgct tcatatttcc ttttctttcc ctctctgttc ctgcacccaa gttctctctg
481 tgtccccctc gcgggccccg cacctcgcgt cccggatcgc tctgattccg cgactccttg
541 gccgccgctg cgcatggaaa gctctgccaa gatggagagc ggcggcgccg gccagcagcc
601 ccagccgcag ccccagcagc ccttcctgcc gcccgcagcc tgtttctttg ccacggccgc
661 agccgcggcg gccgcagccg ccgcagcggc agcgcagagc gcgcagcagc agcagcagca
721 gcagcagcag cagcagcagg cgccgcagct gagaccggcg gccgacggcc agccctcagg
781 gggcggtcac aagtcagcgc ccaagcaagt caagcgacag cgctcgtctt cgcccgaact
841 gatgcgctgc aaacgccggc tcaacttcag cggctttggc tacagcctgc cgcagcagca
901 gccggccgcc gtggcgcgcc gcaacgagcg cgagcgcaac cgcgtcaagt tggtcaacct
961 gggctttgcc acccttcggg agcacgtccc caacggcgcg gccaacaaga agatgagtaa
1021 ggtggagaca ctgcgctcgg cggtcgagta catccgcgcg ctgcagcagc tgctggacga
1081 gcatgacgcg gtgagcgccg ccttccaggc aggcgtcctg tcgcccacca tctcccccaa
1141 ctactccaac gacttgaact ccatggccgg ctcgccggtc tcatcctact cgtcggacga
1201 gggctcttac gacccgctca gccccgagga gcaggagctt ctcgacttca ccaactggtt
1261 ctgaggggct cggcctggtc aggccctggt gcgaatggac tttggaagca gggtgatcgc
1321 acaacctgca tctttagtgc tttcttgtca gtggcgttgg gagggggaga aaaggaaaaa
1381 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aa
//