LOCUS BC003107 976 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens inhibitor of DNA binding 3, dominant negative
helix-loop-helix protein, mRNA (cDNA clone MGC:1988 IMAGE:3543936),
complete cds.
ACCESSION BC003107
VERSION BC003107.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 976)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 976)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (13-FEB-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 8 Row: a Column: 24
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 32171181.
FEATURES Location/Qualifiers
source 1..976
/db_xref="H-InvDB:HIT000031435"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:1988 IMAGE:3543936"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_20"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..976
/gene="ID3"
/gene_synonym="HEIR-1"
/db_xref="GeneID:3399"
/db_xref="HGNC:HGNC:5362"
/db_xref="MIM:600277"
CDS 87..446
/gene="ID3"
/gene_synonym="HEIR-1"
/codon_start=1
/product="inhibitor of DNA binding 3, dominant negative
helix-loop-helix protein"
/protein_id="AAH03107.1"
/db_xref="GeneID:3399"
/db_xref="HGNC:HGNC:5362"
/db_xref="MIM:600277"
/translation="MKALSPVRGCYEAVCCLSERSLAIARGRGKGPAAEEPLSLLDDM
NHCYSRLRELVPGVPRGTQLSQVEILQRVIDYILDLQVVLAEPAPGPPDGPHLPIQTA
ELAPELVISNDKRSFCH"
BASE COUNT 212 a 285 c 262 g 217 t
ORIGIN
1 cgagcgtgcg cgcgttgcag gtcactgtag cgggacttct tttggttttc tttctctttg
61 gggcacctct ggactcactc cccagcatga aggcgctgag cccggtgcgc ggctgctacg
121 aggcggtgtg ctgcctgtcg gaacgcagtc tggccatcgc ccggggccga gggaagggcc
181 cggcagctga ggagccgctg agcttgctgg acgacatgaa ccactgctac tcccgcctgc
241 gggaactggt acccggagtc ccgagaggca ctcagcttag ccaggtggaa atcctacagc
301 gcgtcatcga ctacattctc gacctgcagg tagtcctggc cgagccagcc cctggacccc
361 ctgatggccc ccaccttccc atccagacag ccgagctcgc tccggaactt gtcatctcca
421 acgacaaaag gagcttttgc cactgactcg gccgtgtcct gacacctcca gaacgcaggt
481 gctggcgccc gttctgcctg ggaccccggg aacctctcct gccggaagcc ggacggcagg
541 gatgggcccc aacttcgccc tgcccacttg acttcaccaa atcccttcct ggagactaaa
601 cctggtgctc aggagcgaag gactgtgaac ttgtggcctg aagagccaga gctagctctg
661 gccaccagct gggcgacgtc accctgctcc caccccaccc ccaagttcta aggtcttttc
721 agagcgtgga ggtgtggaag gagtggctgc tctccaaact atgccaaggc ggcggcagag
781 ctggtcttct ggtctccttg gagaaaggtt ctgttgccct gatttatgaa ctctataata
841 gagtatatag gttttgtacc ttttttacag gaaggtgact ttctgtaaca atgcgatgta
901 tattaaactt tttataaaag ttaacatttt gcataataaa cgatttttaa acacttgaaa
961 aaaaaaaaaa aaaaaa
//