LOCUS BC003098 2636 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens hydroxysteroid (17-beta) dehydrogenase 4, mRNA (cDNA clone MGC:1720 IMAGE:3502915), complete cds. ACCESSION BC003098 VERSION BC003098.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2636) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2636) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (13-FEB-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 6 Row: n Column: 14 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 4504504. FEATURES Location/Qualifiers source 1..2636 /db_xref="H-InvDB:HIT000031426" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:1720 IMAGE:3502915" /tissue_type="Brain, neuroblastoma" /clone_lib="NIH_MGC_19" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..2636 /gene="HSD17B4" /gene_synonym="MFE-2" /db_xref="GeneID:3295" /db_xref="HGNC:HGNC:5213" /db_xref="MIM:601860" CDS 68..2278 /gene="HSD17B4" /gene_synonym="MFE-2" /codon_start=1 /product="hydroxysteroid (17-beta) dehydrogenase 4" /protein_id="AAH03098.1" /db_xref="GeneID:3295" /db_xref="HGNC:HGNC:5213" /db_xref="MIM:601860" /translation="MGSPLRFDGRVVLVTGAGAGLGRAYALAFAERGALVVVNDLGGD FKGVGKGSLAADKVVEEIRRRGGKAVANYDSVEEGEKVVKTALDAFGRIDVVVNNAGI LRDRSFARISDEDWDIIHRVHLRGSFQVTRAAWEHMKKQKYGRIIMTSSASGIYGNFG QANYSAAKLGLLGLANSLAIEGRKSNIHCNTIAPNAGSRMTQTVMPEDLVEALKPEYV APLVLWLCHESCEENGGLFEVGAGWIGKLRWERTLGAIVRQKNHPMTPEAVKANWKKI CDFENASKPQSIQESTGSIIEVLSKIDSEGGVSANHTSRATSTATSGFAGAIGQKLPP FSYAYTELEAIMYALGVGASIKDPKDLKFIYEGSSDFSCLPTFGVIIGQKSMMGGGLA EIPGLSINFAKVLHGEQYLELYKPLPRAGKLKCEAVVADVLDKGSGVVIIMDVYSYSE KELICHNQFSLFLVGSGGFGGKRTSDKVKVAVAIPNRPPDAVLTDTTSLNQAALYRLS GDWNPLHIDPNFASLAGFDKPILHGLCTFGFSARRVLQQFADNDVSRFKAIKARFAKP VYPGQTLQTEMWKEGNRIHFQTKVQETGDIVISNAYVDLAPTSGTSAKTPSEGGKLQS TFVFEEIGRRLKDIGPEVVKKVNAVFEWHITKGGNIGAKWTIDLKSGSGKVYQGPAKG AADTTIILSDEDFMEVVLGKLDPQKAFFSGRLKARGNIMLSQKLQMILKDYAKL" BASE COUNT 779 a 480 c 646 g 731 t ORIGIN 1 ctcctgtccc gcagtcggcg tccagcggct ctgcttgttc gtgtgtgtgt cgttgcaggc 61 cttattcatg ggctcaccgc tgaggttcga cgggcgggtg gtactggtca ccggcgcggg 121 ggcaggattg ggccgagcct atgccctggc ttttgcagaa agaggagcgt tagttgttgt 181 gaatgatttg ggaggggact tcaaaggagt tggtaaaggc tccttagctg ctgataaggt 241 tgttgaagaa ataagaagga gaggtggaaa agcagtggcc aactatgatt cagtggaaga 301 aggagagaag gttgtgaaga cagccctgga tgcttttgga agaatagatg ttgtggtcaa 361 caatgctgga attctgaggg atcgttcctt tgctaggata agtgatgaag actgggatat 421 aatccacaga gttcatttgc ggggttcatt ccaagtgaca cgggcagcat gggaacacat 481 gaagaaacag aagtatggaa ggattattat gacttcatca gcttcaggaa tatatggcaa 541 ctttggccag gccaattata gtgctgcaaa gttgggtctt ctgggccttg caaattctct 601 tgcaattgaa ggcaggaaaa gcaacattca ttgtaacacc attgctccta atgcgggatc 661 acggatgact cagacagtta tgcctgaaga tcttgtggaa gccctgaagc cagagtatgt 721 ggcacctctt gtcctttggc tttgtcacga gagttgtgag gagaatggtg gcttgtttga 781 ggttggagca ggatggattg gaaaattacg ctgggagcgg actcttggag ctattgtaag 841 acaaaagaat cacccaatga ctcctgaggc agtcaaggct aactggaaga agatctgtga 901 ctttgagaat gccagcaagc ctcagagtat ccaagaatca actggcagta taattgaagt 961 tctgagtaaa atagattcag aaggaggagt ttcagcaaat catactagtc gtgcaacgtc 1021 tacagcaaca tcaggatttg ctggagctat tggccagaaa ctccctccat tttcttatgc 1081 ttatacggaa ctggaagcta ttatgtatgc ccttggagtg ggagcgtcaa tcaaggatcc 1141 aaaagatttg aaatttattt atgaaggaag ttctgatttc tcctgtttgc ccaccttcgg 1201 agttatcata ggtcagaaat ctatgatggg tggaggatta gcagaaattc ctggactttc 1261 aatcaacttt gcaaaggttc ttcatggaga gcagtactta gagttatata aaccacttcc 1321 cagagcagga aaattaaaat gtgaagcagt tgttgctgat gtcctagata aaggatccgg 1381 tgtagtgatt attatggatg tctattctta ttctgagaag gaacttatat gccacaatca 1441 gttctctctc tttcttgttg gctctggagg ctttggtgga aaacggacat cagacaaagt 1501 caaggtagct gtagccatac ctaatagacc tcctgatgct gtacttacag ataccacctc 1561 tcttaatcag gctgctttgt accgcctcag tggagactgg aatcccttac acattgatcc 1621 taactttgct agtctagcag gttttgacaa gcccatatta catggattat gtacatttgg 1681 attttctgcc aggcgtgtgt tacagcagtt tgcagataat gatgtgtcaa gattcaaggc 1741 aattaaggct cgttttgcaa aaccagtata tccaggacaa actctacaaa ctgagatgtg 1801 gaaggaagga aacagaattc attttcaaac caaggtccaa gaaactggag acattgtcat 1861 ttcaaatgca tatgtggatc ttgcaccaac atctggtact tcagctaaga caccctctga 1921 gggcgggaag cttcagagta cctttgtatt tgaggaaata ggacgccgcc taaaggatat 1981 tgggcctgag gtggtgaaga aagtaaatgc tgtatttgag tggcatataa ccaaaggcgg 2041 aaatattggg gctaagtgga ctattgacct gaaaagtggt tctggaaaag tgtaccaagg 2101 ccctgcaaaa ggtgctgctg atacaacaat catactttca gatgaagatt tcatggaggt 2161 ggtcctgggc aagcttgacc ctcagaaggc attctttagt ggcaggctga aggccagagg 2221 gaacatcatg ctgagccaga aacttcagat gattcttaaa gactacgcca agctctgaag 2281 ggcacactac actattaata aaaatggaat cattaaatac tctcttcacc caaatatgct 2341 tgattattct gcaaaagtga ttagaactaa gatgcagggg aaattgctta acattttcag 2401 atatcagata actgcagatt ttcattttct actaattttt catgtatcat tatttttaca 2461 aggaactata tataagctag cacataatta tccttctgtt cttagatctg tatcttcata 2521 ataaaaaatt ttgcccaagt cctgtttcct tagaatttgt gatagcattg ataagttgaa 2581 aggaaaatta aatcaataaa ggcctttgat acctttaaaa aaaaaaaaaa aaaaaa //