LOCUS BC003090 1637 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens COP9 constitutive photomorphogenic homolog subunit 8 (Arabidopsis), mRNA (cDNA clone MGC:1297 IMAGE:3503287), complete cds. ACCESSION BC003090 VERSION BC003090.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1637) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1637) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (13-FEB-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 6 Row: d Column: 18 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 40805828. FEATURES Location/Qualifiers source 1..1637 /db_xref="H-InvDB:HIT000031419" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:1297 IMAGE:3503287" /tissue_type="Brain, neuroblastoma" /clone_lib="NIH_MGC_19" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..1637 /gene="COPS8" /gene_synonym="COP9" /gene_synonym="CSN8" /gene_synonym="MGC1297" /gene_synonym="SGN8" /db_xref="GeneID:10920" /db_xref="HGNC:HGNC:24335" CDS 49..678 /gene="COPS8" /gene_synonym="COP9" /gene_synonym="CSN8" /gene_synonym="MGC1297" /gene_synonym="SGN8" /codon_start=1 /product="COP9 constitutive photomorphogenic homolog subunit 8 (Arabidopsis)" /protein_id="AAH03090.1" /db_xref="GeneID:10920" /db_xref="HGNC:HGNC:24335" /translation="MPVAVMAESAFSFKKLLDQCENQELEAPGGIATPPVYGQLLALY LLHNDMNNARYLWKRIPPAIKSANSELGGIWSVGQRIWQRDFPGIYTTINAHQWSETV QPIMEALRDATRRRAFALVSQAYTSIIADDFAAFVGLPVEEAVKGILEQGWQADSTTR MVLPRKPVAGALDVSFNKFIPLSEPAPVPPIPNEQQLARLTDYVAFLEN" BASE COUNT 474 a 327 c 340 g 496 t ORIGIN 1 ctggggtttg gctgtccgga cggtgcagcg gcgaggccgg ccgcgaagat gccagtggcg 61 gtgatggcgg aaagcgcctt tagtttcaaa aagttgctgg atcagtgcga gaaccaggag 121 ctcgaggccc ctggaggaat tgctacaccc ccagtgtatg gtcagcttct agctttatat 181 ttgctccata atgacatgaa taatgcaaga tatctttgga aaagaatacc acctgctata 241 aaatctgcaa attctgaact tgggggaatt tggtcagtag gacaaagaat ctggcagaga 301 gatttccctg ggatctatac aaccatcaac gctcaccagt ggtctgagac ggtccagcca 361 attatggaag cacttagaga tgcaacaagg agacgcgcct ttgccctggt ctctcaagcg 421 tatacttcaa tcatcgccga tgattttgca gcctttgttg gacttcctgt agaagaggct 481 gtgaaaggca tattagaaca aggatggcaa gctgattcca ccacaagaat ggttctgccc 541 agaaagccag ttgcaggggc cctggatgtt tcctttaaca agtttattcc cttatcagag 601 cctgctccag ttcccccaat acccaatgaa cagcagttag ccagactgac ggattatgtg 661 gctttccttg aaaactgatt tatcactctg agttcaagat tcatcttcag aatcctgtat 721 actgacaaac gtagaaatgt aaagtttgta ttttcaattt attggatggc ttaagcacct 781 cagcattcct tactatgtga taaaatacat atagaatata agatatacta tatacatttt 841 gtccataaac gttatgctga atagttgttg aaacagttct cattttgtag tatttaataa 901 tctggatgga gcctgtcagt attacagtta gttttctagt gactcataaa ataagatttc 961 ctgtttcatg tagaatagtg tttgtcaact gtcttttctc tgtcccagca catgccgtac 1021 tcttatatgt accattggtt gataattata atgattcatt tggacttgaa gaaagattgt 1081 ccccaggcac agtatctgaa tcactgggga ttatgattca ccctctttgg agaacatgct 1141 ctcttttcac cccccacctc ctgagagcca ctaatgtaag atacagaaac atagctgagg 1201 aacaaataga ccatttccat actaaaccag tttgttaact ttagattttt tccaatagtg 1261 tgagtatatc cattgctggc agtggagggc ttgccatgaa aatgcaactt atttaagaca 1321 tttatgagac atattaactt gtgctgtcgc cttttagaag gagaaactta agtgtggaat 1381 gcattatatg ggcaaagaag ctatgaagat acatgataca ctttgtacaa ctatcctgca 1441 gcccattggt tgcttatatt tatcgcttgg ctcaagttct gccctttgga gaaatactga 1501 gcaagtcttt cattctctgt gtgacagccc tctgaatatt tgaagttgtt tgttgtaact 1561 taaggttata acagccctta gttcatttac tctgcatttg ttcaataaat atttaactga 1621 aaaaaaaaaa aaaaaaa //