LOCUS BC003089 3143 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens RNA binding motif protein 10, mRNA (cDNA clone
MGC:1132 IMAGE:3536058), complete cds.
ACCESSION BC003089
VERSION BC003089.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3143)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3143)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (13-FEB-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 8 Row: f Column: 3
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 23111016.
FEATURES Location/Qualifiers
source 1..3143
/db_xref="H-InvDB:HIT000031418"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:1132 IMAGE:3536058"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..3143
/gene="RBM10"
/gene_synonym="DXS8237E"
/gene_synonym="KIAA0122"
/gene_synonym="MGC1132"
/gene_synonym="MGC997"
/db_xref="GeneID:8241"
/db_xref="HGNC:HGNC:9896"
/db_xref="MIM:300080"
CDS 333..2891
/gene="RBM10"
/gene_synonym="DXS8237E"
/gene_synonym="KIAA0122"
/gene_synonym="MGC1132"
/gene_synonym="MGC997"
/codon_start=1
/product="RNA binding motif protein 10"
/protein_id="AAH03089.1"
/db_xref="GeneID:8241"
/db_xref="HGNC:HGNC:9896"
/db_xref="MIM:300080"
/translation="MEYERRGGRGDRTGRYGATDRSQDDGGENRSRDHDYRDMDYRSY
PREYGSQEGKHDYDDSSEEQSAEIRGQLQSHGVQAREVRLMRNKSSGQSRGFAFVEFS
HLQDATRWMEANQHSLNILGQKVSMHYSDPKPKINEDWLCNKCGVQNFKRREKCFKCG
VPKSEAEQKLPLGTRLDQQTLPLGGRELSQGLLPLPQPYQAQGVLASQALSQGSEPSS
ENANDTIILRNLNPHSTMDSILGALAPYAVLSSSNVRVIKDKQTQLNRGFAFIQLSTI
EAAQLLQILQALHPPLTIDGKTINVEFAKGSKRDMASNEGSRISAASVASTAIAAAQW
AISQASQGGEGTWATSEEPPVDYSYYQQDEGYGNSQGTESSLYAHGYLKGTKGPGITG
TKGDPTGAGPEASLEPGADSVSMQAFSRAQPGAAPGIYQQSAEASSSQGTAANSQSYT
IMSPAVLKSELQSPTHPSSALPPATSPTAQESYSQYPVPDVSTYQYDETSGYYYDPQT
GLYYDPNSQYYYNAQSQQYLYWDGERRTYVPALEQSADGHKETGAPSKEGKEKKEKHK
TKTAQQIAKDMERWARSLNKQKENFKNSFQPISSLRDDERRESATADAGYAILEKKGA
LAERQHTSMDLPKLASDDRPSPPRGLVAAYSGESDSEEEQERGGPEREEKLTDWQKLA
CLLCRRQFPSKEALIRHQQLSGLHKQNLEIHRRAHLSENELEALEKNDMEQMKYRDRA
AERREKYGIPEPPEPKRRKYGGISTASVDFEQPTRDGLGSDNIGSRMLQAMGWKEGSG
LGRKKQGIVTPIEAQTRVRGSGLGARGSSYGVTSTESYKETLHKTMVTRFNEAQ"
BASE COUNT 764 a 928 c 941 g 510 t
ORIGIN
1 gtgactgtgg ccggctggga gtaggcggca gtgagtttcc ctgggagggc agcgcgcttg
61 gcgcttctcc cctccccccg atctgcctcc agtctcggac ttggttgttg cgcgctccgg
121 ctccggctga gctgggagag ttggaggagg tggcggcggg cagaggtgat gtctgggagc
181 ccttccttga cagcccgggc cgagaagagt ccctgcagga agcatcaccc aggctggcag
241 atcatggtag cagcagcggg ggtggctggg aagtgaaacg gagccagcgg ctgaggaggg
301 gccccagcag cccccgaagg ccctatcagg acatggagta tgaaagacgt ggtggtcgtg
361 gtgacaggac tggccgctat ggagccactg accgctcgca ggatgatggt ggggagaacc
421 gcagccgaga ccacgactac cgggacatgg actaccgttc atatcctcgc gagtatggca
481 gccaggaggg caagcatgac tatgacgact catctgagga gcagagtgcg gagatccgtg
541 gccagctgca gtcgcacggc gtgcaagcac gggaggttcg gctgatgcgg aacaaatctt
601 caggtcagag ccggggcttc gccttcgtcg agtttagtca cttgcaggac gctacacgat
661 ggatggaagc caatcagcac tccctcaaca tcctgggcca gaaggtgtcg atgcactaca
721 gtgaccccaa gcccaagatc aatgaggact ggctgtgcaa taagtgtggc gtccagaact
781 tcaaacgccg agagaagtgc ttcaaatgtg gcgtgcccaa gtcagaggca gagcagaagc
841 tgcccctcgg cacgaggctg gatcagcaga cactgccact gggtggccgg gagctgagcc
901 agggcctgct tcccctgccg cagccctacc aggcccaggg agtcctggcc tcccaagccc
961 tgtcacaggg ctcggagcca agctcagaga acgccaatga caccatcatt ttgcgcaacc
1021 tgaacccaca cagcaccatg gattccatcc tgggggccct ggcaccctac gcggtgctgt
1081 cctcctccaa cgtgcgcgtc ataaaggaca agcagaccca actgaaccgc ggctttgcct
1141 tcatccagct ctccaccatc gaggcagccc agctgctgca gatcctgcag gccctgcacc
1201 caccactcac tatcgacggc aagaccatca atgttgagtt tgccaagggt tctaagaggg
1261 acatggcctc caatgaaggc agtcgcatca gtgctgcctc tgtggccagc actgccattg
1321 ctgcggccca gtgggccatc tcacaggcct cccaaggtgg ggagggtacc tgggccacct
1381 ccgaggagcc gccggtcgac tacagctact accaacagga tgagggctat ggcaacagcc
1441 agggcacaga gtcttccctc tatgcccatg gctacctcaa gggcaccaag ggccctggca
1501 tcactggaac caaaggggat cccactggag caggtcccga ggcctcccta gagcctgggg
1561 ccgactctgt gtcgatgcag gctttctctc gcgcccagcc tggtgctgct cctggcatct
1621 accaacaatc agccgaggcg agcagtagcc agggcactgc tgccaacagc cagtcgtata
1681 ccatcatgtc acccgctgtg ctcaaatctg agctccagag ccctacccat cctagttctg
1741 ctctcccacc ggctaccagc cccactgccc aggaatccta cagccagtac cctgttcccg
1801 acgtctctac ctaccagtac gatgagacct ccggctacta ctatgacccc cagaccggcc
1861 tctactatga ccccaactcc cagtattact acaatgctca gagccagcag tacctgtact
1921 gggatgggga gaggcggacc tatgttcccg ccctggagca gtcggccgac ggacataagg
1981 agacaggggc accctcgaag gagggcaaag agaagaagga gaagcacaag accaagacag
2041 ctcaacagat tgccaaggac atggaacgct gggcccgcag tctcaacaaa caaaaagaaa
2101 acttcaaaaa tagcttccag cctatcagct ccctgcgaga tgacgagagg cgggagtcag
2161 ccactgcaga tgctggctat gccatcctcg agaagaaggg agcactagcc gagagacagc
2221 acaccagcat ggatctcccg aaattggcca gtgacgaccg cccaagccct ccgcgaggac
2281 tggtggcagc ctacagcggg gagagtgaca gtgaggagga gcaggagcgt gggggccctg
2341 agcgggagga gaagctcacc gactggcaga agctggcctg tctgctctgc cgacgccagt
2401 tccccagcaa agaggcgctc atccggcacc agcagctctc agggctccac aagcaaaacc
2461 ttgagattca ccggcgagcc cacttgtcag aaaacgagct agaagcacta gagaagaatg
2521 acatggagca aatgaagtac cgggaccgtg cagctgaacg cagagaaaag tatggcatcc
2581 ccgagccgcc agagcccaag aggaggaagt acggcggcat atccacagcc tctgtagact
2641 tcgagcagcc tactcgggac gggctgggca gtgacaacat tggcagtcgg atgctgcagg
2701 ccatgggctg gaaagagggc agcggcctgg gccgcaagaa gcagggcatt gtaacgccta
2761 tcgaggccca aacacgggtg cggggctccg gcctgggtgc acggggcagc tcctacgggg
2821 tcacctcaac cgagtcctac aaggagacac tgcacaagac aatggtgacc cgcttcaacg
2881 aggcccagtg agcagcttca agagcaactt ctccacatgt tgggtgtcca tcctggggca
2941 gggaaggaca gagtgttgga tggctgggac ggggccttgc tcttgtcggc cagcccactc
3001 cccagccaga gagggcttga ccaaatcaaa ttgaggtggt gacttttgtt ggaaaattgg
3061 gctgggatca cgtcctgttt tgtaataaaa gctgaaaagt ctgcaaaaaa aaaaaaaaaa
3121 aaaaaaaaaa aaaaaaaaaa aaa
//