LOCUS BC003082 2541 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens transmembrane protein 48, mRNA (cDNA clone MGC:970 IMAGE:3509727), complete cds. ACCESSION BC003082 VERSION BC003082.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2541) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2541) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (12-FEB-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Sep 16, 2003 this sequence version replaced BC003082.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 7 Row: p Column: 18 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 37059744. FEATURES Location/Qualifiers source 1..2541 /db_xref="H-InvDB:HIT000031412" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:970 IMAGE:3509727" /tissue_type="Brain, neuroblastoma" /clone_lib="NIH_MGC_19" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..2541 /gene="TMEM48" /gene_synonym="FLJ10407" /gene_synonym="NDC1" /gene_synonym="RP4-654H19.1" /db_xref="GeneID:55706" /db_xref="HGNC:HGNC:25525" /db_xref="MIM:610115" CDS 242..2266 /gene="TMEM48" /gene_synonym="FLJ10407" /gene_synonym="NDC1" /gene_synonym="RP4-654H19.1" /codon_start=1 /product="transmembrane protein 48" /protein_id="AAH03082.1" /db_xref="GeneID:55706" /db_xref="HGNC:HGNC:25525" /db_xref="MIM:610115" /translation="MATAVSRPCAGRSRDILWRVLGWRIVASIVWSVLFLPICTTVFI IFSRIDLFHPIQWLSDSFSDLYSSYVIFYFLLLSVVIIIISIFNVEFYAVVPSIPCSR LALIGKIIHPQQLMHSFIHAAMGMVMAWCAAVITQGQYSFLVVPCTGTNSFDSPAAQT CLNEYHLFFLLTGAFMGYSYSLLYFVNNMNYLPFPIIQQYKFLRFRRSLLLLVKHSCV ESLFLVRNFCILYYFLGYIPKAWISTAMNLHIDEQVHRPLDTVSGLLNLSLLYHVWLC GVFLLTTWYVSWILFKIYATEAHVFPVQPPFAEGSDECLPKVLNSNPPPIIKYLALQD LMLLSQYSPSRRQEVFSLSQPGGHPHNWTAISRECLNLLNGMTQKLILYQEAAATNGR VSSSYPVEPKKLNSPEETAFQTPKSSQMPRPSVPPLVKTSLFSSKLSTPDVVSPFGTP FGSSVMNRMAGIFDVNTCYGSPQSPQLIRRGPRLWTSASDQQMTEFSNPSPSTSISAE GKTMRQPSVIYSWIQNKREQIKNFLSKRVLIMYFFSKHPEASIQAVFSDAQMHIWALE GLSHLVAASFTEDRFGVVQTTLPAILNTLLTLQEAVDKYFKLPHASSKPPRISGSLVD TSYKTLRFAFRASLKTAIYRITTTFGEHLNAVQASAEHQKRLQQFLEFKE" BASE COUNT 669 a 561 c 548 g 763 t ORIGIN 1 cagagggcgg ttcctggagt tacagccgcg tttgcgggac gtgtctgcgc ggcagtcctg 61 gcctgttgag cttgtccaga cgaagcctcg cagggatggg ttggagcctg ggccgggctt 121 cgctcaggca gcgtttgagg cagacccagc agggtcctcc tggggccttc ctgcctttga 181 actgcggtgg cgggcgggcg cacggtctcc tgtacgccct agactagggg ccgccatctc 241 catggccacg gccgtgagcc ggccctgcgc cggcaggtcg cgggacatac tgtggcgcgt 301 tttgggctgg aggatagttg caagtattgt ttggtcagtg ctatttctac ccatctgcac 361 cacagtattt ataattttca gcaggattga tttgtttcat cctatacagt ggctgtctga 421 ttctttcagt gacctgtata gttcctatgt aatcttttac ttcctgctgc tgtcagtggt 481 aataataata ataagtattt tcaatgtgga gttctatgca gttgtgcctt ctattccttg 541 ctccagacta gctctgatag ggaagatcat tcatcctcag caactcatgc actcatttat 601 tcatgctgca atgggaatgg tgatggcctg gtgtgctgca gtgataaccc agggccagta 661 cagctttctt gtggttccct gcactggtac taacagcttt gatagccctg ctgcgcaaac 721 ctgcttaaat gaatatcatc tttttttcct actgactgga gcatttatgg gctatagcta 781 tagcctcctg tattttgtta acaacatgaa ctatcttcca tttcccatca tacagcaata 841 caagttcttg cgttttagga gatctctgct cttattagtt aaacacagtt gtgtggaatc 901 actgttcctg gttagaaatt tctgcatttt atattatttt cttggctata ttcccaaagc 961 ttggattagc actgctatga accttcacat agatgagcag gttcataggc cacttgacac 1021 agtgagtggc ctcttaaatc tctcgttact ctaccatgtc tggctgtgtg gtgtctttct 1081 cctgacgact tggtatgtct catggatact cttcaaaatc tatgccacag aggctcatgt 1141 gtttcctgtt caaccaccat ttgcagaagg gtcagatgag tgccttccaa aagtgttaaa 1201 tagcaatcct ccccccatca taaagtattt agccttgcag gacctgatgt tgctttctca 1261 atattctcct tcacgaagac aagaagtttt cagcctcagc caaccaggtg gacatcccca 1321 caattggaca gccatttcaa gggagtgttt gaatctttta aatggtatga ctcagaaact 1381 gattctctat caagaagctg ctgctacgaa tgggagagtg tcttcatctt acccagtgga 1441 acctaagaaa ttaaattctc cagaagaaac tgcttttcag acaccaaaat ctagccagat 1501 gcctcggcct tcagtgccac cattagttaa aacatcactg ttttcttcaa aattatctac 1561 acctgatgtt gtgagcccat ttgggacccc atttggctct agtgtaatga atcggatggc 1621 tggaattttt gatgtaaaca cctgctatgg gtcaccgcaa agtcctcagc taataagaag 1681 ggggccaaga ttgtggacat cagcttctga tcagcaaatg actgaatttt ctaatccttc 1741 tccatctacc tctattagtg ctgagggtaa gacaatgaga caacccagtg tgatttattc 1801 atggattcag aataaacgtg aacagattaa gaatttcttg tcaaaacggg tgctgataat 1861 gtattttttc agtaagcacc cagaggcctc cattcaggct gttttttcag atgcccaaat 1921 gcatatttgg gcattagaag gtctgtcgca cttagtagca gcatcattta cagaggatag 1981 atttggagtt gtccagacga cactaccagc tatccttaat actttgttga cactgcaaga 2041 ggcagtcgac aagtacttta agcttcctca tgcttccagt aaaccacccc ggatttcagg 2101 aagccttgtg gacacttcat ataaaacatt aagatttgca ttcagagcat cactgaaaac 2161 tgccatctat cgaataacta ctacatttgg tgaacatctg aatgctgtgc aagcatctgc 2221 agaacatcag aaaagacttc aacagttctt ggagttcaaa gaatagttaa gtaatataaa 2281 ctgtgttcat tacactgctg atacaactac agatgggaca gtaaatgttc agcattcttg 2341 gatcagaaga aaacggacta attagatgct tcctttgtcg tggtggttgc tttgaaaact 2401 atactttaat gggagaaatc atggaaagaa attctcaaca gaataactga aaactgcctt 2461 ttctgtaccg attgcttttt gtgtgtgtgg tataataaaa tctttattca attttacaga 2521 aaaaaaaaaa aaaaaaaaaa a //