LOCUS BC003071 2202 bp mRNA linear HUM 26-JUN-2008
DEFINITION Homo sapiens tocopherol (alpha) transfer protein-like, mRNA (cDNA
clone MGC:2470 IMAGE:2989837), complete cds.
ACCESSION BC003071
VERSION BC003071.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2202)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2202)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (12-FEB-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC003071.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 3 Row: e Column: 20
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 34147379.
FEATURES Location/Qualifiers
source 1..2202
/db_xref="H-InvDB:HIT000031404"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:2470 IMAGE:2989837"
/tissue_type="Ovary, adenocarcinoma"
/clone_lib="NIH_MGC_9"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2202
/gene="TTPAL"
/db_xref="GeneID:79183"
/db_xref="HGNC:HGNC:16114"
CDS 125..1153
/gene="TTPAL"
/codon_start=1
/product="tocopherol (alpha) transfer protein-like"
/protein_id="AAH03071.2"
/db_xref="GeneID:79183"
/db_xref="HGNC:HGNC:16114"
/translation="MSEESDSLRTSPSVASLSENELPPPPEPPGYVCSLTEDLVTKAR
EELQEKPEWRLRDVQALRDMVRKEYPNLSTSLDDAFLLRFLRARKFDYDRALQLLVNY
HSCRRSWPEVFNNLKPSALKDVLASGFLTVLPHTDPRGCHVVCIRPDRWIPSNYPITE
NIRAIYLTLEKLIQSEETQVNGIVILADYKGVSLSKASHFGPFIAKKVIGILQDGFPI
RIKAVHVVNEPRIFKGIFAIIKPFLKEKIANRFFLHGSDLNSLHTNLPRSILPKEYGG
TAGELDTATWNAVLLASEDDFVKEFCQPVPACDSILGQTLLPEGLTSDAQCDDSLRAV
KSQLYSCY"
BASE COUNT 578 a 541 c 520 g 563 t
ORIGIN
1 gcagggagtg cgggtcggtt ctgcgtgcgc tgccggacga ggctcccgcc gccgattgac
61 ccgcgctccg cccgtagtcg ggccgttctg ttccaagaga taaccattgg gaccttggta
121 gctaatgtcc gaagaaagtg actctctgag aaccagccct tctgtggcct cactctctga
181 aaatgagctg ccaccaccac ctgagcctcc gggctatgtg tgctcactga cagaagacct
241 ggtcaccaaa gcccgggaag agctgcagga aaagccggaa tggagacttc gagatgtgca
301 ggcccttcgt gacatggtgc ggaaggagta ccccaacctg agcacatccc tcgacgatgc
361 cttcctgctg cgcttcctcc gagcccgcaa gtttgattac gaccgggccc tgcagctcct
421 cgtcaactac cacagctgta gaagaagctg gcccgaagtc ttcaataact tgaagccatc
481 agccttaaaa gatgtccttg cttccgggtt cctcaccgtg ctgccccaca ctgaccccag
541 gggctgccat gtcgtctgca tccgcccaga cagatggata ccaagcaact atccaattac
601 tgaaaacatc cgagccatat acttgacctt agaaaaactc attcagtctg aagaaaccca
661 ggtgaatgga attgtaattc ttgcagacta caaaggagtg agtttatcaa aagcatctca
721 ctttggccct tttatagcca aaaaggtgat tggcatcctc caggatggtt tccccattcg
781 gataaaagca gtccatgtgg tgaatgaacc tcgaatattt aaaggcattt ttgccatcat
841 aaaaccattt ctaaaggaga aaatagcaaa cagattcttc ctccatgggt ctgacttgaa
901 ctctctccac acaaaccttc caagaagcat cctccccaag gagtatgggg gcacggctgg
961 ggagctggac actgccacct ggaacgcggt actgctggct tcagaagacg attttgtgaa
1021 agagttctgc caacctgttc ctgcctgtga cagcatcctg ggccagacgc tgctgcccga
1081 gggcctgacc tcagatgcac agtgtgacga ctccttgcga gctgtgaagt cacagctgta
1141 ctcctgctac tagcccgtcc cccagggtca ccatctttaa ttcttttcct tcttttcttt
1201 ggagaggcac aaggagaatt taagggtcca tggattcagt cttgctcctt gtaattaaac
1261 tgcaggatgg aggaacagcc tgagatatga gcatgagccc attttggggt aagcctttgg
1321 ttactttaat tactccatgg aagacatgga aaatgtcccc actgattctt aaacatttgg
1381 aatcccagtc tgcaactatt aatctggagg ctatatctat tttgttttgc tttttggttg
1441 gggggtggtg atctggttct tacacatctt ggaagcaaga acaatcagga ccaaagtcac
1501 tttgatccca cttttccagg agaaaaacca cctgtttggc cagtgagaac tacttgtatg
1561 aaataatttg gccaaacctt cagtgtgacc aaatgtgaga ctgggagttt gtgtttttca
1621 caggaaccct aagtatagac ctctgctgct catcaggaaa cttactggag atgaaggccc
1681 cagctgttgt caccgggttt ggaaagcacc ttaactgaat catgtaagca tcaggacata
1741 agcagcactt tgtggtcaaa tgtggaagcc ggagacttca aagcacctct gggacccact
1801 ggttgaagtt tgcaatagaa acttaagttt tcccaaatcc ataaagcctt agccctggtt
1861 ctcaatagaa tcagggacct agcaggaaat gattttactc aacctaaaat gctggatccc
1921 aggcccgtgt agctataaga attctggcct ggatcccagg tgtacaacta tggacaagat
1981 atgggcctct actttctcct ctataaaatg aggctggatg aaatgtcagc tagggccatt
2041 ttggctgctg aggctctggg atttggttta gttactgaat gttagatttt ctgcctagaa
2101 agataactat ctagatacaa gtggttggat cctgtttttg tttgtggtac atgtgtcttt
2161 ccaagagaga tgtgtcacca attaaaaaaa aaaaaaaaaa aa
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