LOCUS BC003045 3598 bp mRNA linear HUM 11-AUG-2006 DEFINITION Homo sapiens intraflagellar transport 122 homolog (Chlamydomonas), mRNA (cDNA clone MGC:4379 IMAGE:2823536), complete cds. ACCESSION BC003045 VERSION BC003045.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3598) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3598) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (06-FEB-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: DCTD/DTP cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 9 Row: c Column: 12 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 16554618. FEATURES Location/Qualifiers source 1..3598 /db_xref="H-InvDB:HIT000086207" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:4379 IMAGE:2823536" /tissue_type="Lung, small cell carcinoma" /clone_lib="NIH_MGC_7" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..3598 /gene="IFT122" /gene_synonym="SPG" /gene_synonym="WDR10p" /gene_synonym="WDR140" /db_xref="GeneID:55764" /db_xref="HGNC:HGNC:13556" /db_xref="MIM:606045" CDS 88..3483 /gene="IFT122" /gene_synonym="SPG" /gene_synonym="WDR10p" /gene_synonym="WDR140" /codon_start=1 /product="intraflagellar transport 122 homolog (Chlamydomonas)" /protein_id="AAH03045.2" /db_xref="GeneID:55764" /db_xref="HGNC:HGNC:13556" /db_xref="MIM:606045" /translation="MRAVLTWRDKAEHCINDIAFKPDGTQLILAAGSRLLVYDTSDGT LLQPLKGHKDTVYCVAYAKDGLWSPEQKSVSKHKSSSKIICCSWTNDGQYLALGMFNG IISIRNKNGEEKVKIERPGGSLSPIWSICWNPSREERNDILAVADWGQKVSFYQLSGK QIGKDRALNFDPCCISYFTKGEYILLGGSDKQVSLFTKDGVRLGTVGEQNSWVWTCQA KPDSNYVVVGCQDGTISFYQLIFSTVHGLYKDRYAYRDSMTDVIVQHLITEQKVRIKC KELVKKIAIYRNRLAIQLPEKILIYELYSEDLSDMHYRVKEKIIKKFECNLLVVCANH IILCQEKRLQCLSFSGVKEREWQMESLIRYIKVIGGPPGREGLLVGLKNGQILKIFVD NLFAIVLLKQATAVRCLDMSASRKKLAVVDENDTCLVYDIDTKELLFQEPNANSVAWN TQCEDMLCFSGGGYLNIKASTFPVHRQKLQGFVVGYNGSKIFCLHVFSISAVEVPQSA PMYQYLDRKLFKEAYQIACLGVTDTDWRELAMEALEGLDFETAKKAFIRVQDLRYLEL ISSIEERKKRGETNNDLFLADVFSYQGKFHEAAKLYKRSGHENLALEMYTDLCMFEYA KDFLGSGDPKETKMLITKQADWARNIKEPKAAVEMYISAGEHVKAIEICGDHGWVDML IDIARKLDKAEREPLLLCATYLKKLDSPGYAAETYLKMGDLKSLVQLHVETQRWDEAF ALGEKHPEFKDDIYMPYAQWLAENDRFEEAQKAFHKAGRQREAVQVLEQLTNNAVAES RFNDAAYYYWMLSMQCLDIAQADPAQKDTMLGKFYHFQRLAELYHGYHAIHRHTEDPF SVHRPETLFNISRFLLHSLPKDTPSGISKVKILFTLAKQSKALGAYRLARHAYDKLRG LYIPARFQKSIELGTLTIRAKPFHDSEELVPLCYRCSTNNPLLNNLGNVCINCRQPFI FSASSYDVLHLVEFYLEEGITDEEAISLIDLEVLRPKRDDRQLEIANNSSQILRLVET KDSIGDEDPFTAKLSFEQGGSEFVPVVVSRLVLRSMSRRDVLIKRWPPPLRWQYFRSL LPDASITMCPSCFQMFHSEDYELLVLQHGCCPYCRRCKDDPGP" BASE COUNT 902 a 926 c 989 g 781 t ORIGIN 1 cttgtggagt ggcgaccgtt agtgaggcgg ttgctgagac agacgctgag gcgggtagga 61 ggagcccgag ccgtaaggga agccgtgatg agggccgtgt tgacgtggag agataaagcc 121 gagcactgta taaatgacat cgcatttaag cctgatggaa ctcaactgat tttggctgcc 181 ggaagcagat tactggttta tgacacctct gatggcacct tacttcagcc cctcaaggga 241 cacaaagaca ctgtgtactg tgtggcatat gcgaaggatg ggttgtggtc tcctgaacag 301 aagtctgtct ccaaacacaa atcaagcagc aagatcatct gctgcagctg gacaaatgat 361 ggtcagtacc tggcgctggg gatgttcaat gggatcatca gcatacggaa caaaaatggc 421 gaggagaaag taaagatcga gcggccgggg ggctccctct cgccaatatg gtccatctgc 481 tggaaccctt caagagagga acgtaatgac atcctggctg tggctgactg gggacagaaa 541 gtttccttct accagctgag tggaaaacag attggaaagg atcgggcact gaactttgac 601 ccctgctgca tcagctactt tactaaaggc gagtacattt tgctgggggg ttcagacaag 661 caagtatctc ttttcaccaa ggatggagtg cggcttggga ctgttgggga gcagaactcc 721 tgggtgtgga cgtgtcaagc gaaaccggat tccaactatg tggtggtcgg ctgccaggac 781 ggcaccattt ccttctacca gcttattttc agcacagtcc atgggcttta caaggaccgc 841 tatgcctaca gggatagcat gactgacgtc attgtgcagc acctgatcac tgagcagaaa 901 gttcggatta aatgcaaaga gcttgtcaag aagattgcca tctacagaaa tcgattggct 961 atccaactgc cagagaaaat cctcatctat gagttgtatt cagaggactt atcagacatg 1021 cattaccggg taaaggagaa gattatcaag aagtttgagt gcaacctcct ggtggtgtgt 1081 gccaatcaca tcatcctgtg ccaggagaaa cggctgcagt gcctgtcctt cagcggagtg 1141 aaggagcggg agtggcagat ggagtctctc attcgttaca tcaaggtgat cggtggccct 1201 cctggaagag aaggcctctt agtggggctg aagaatggac agatcctgaa gatcttcgtg 1261 gacaatctct ttgctatcgt cctgctgaag caggccacag ctgtgcgctg cttggacatg 1321 agtgcctccc gtaagaagct ggccgtggta gatgaaaatg acacttgcct ggtgtatgac 1381 atcgacacca aggagctgct ttttcaggaa ccaaacgcca acagtgtagc ttggaacacc 1441 cagtgtgagg acatgctctg cttctcggga ggaggctacc tcaacatcaa agccagcacc 1501 ttccctgtgc accggcagaa gctgcagggc tttgtggtcg gctacaatgg ctccaagatc 1561 ttctgcctcc atgtcttctc catttctgcc gtggaggtgc cgcagtccgc tcccatgtac 1621 cagtacctgg ataggaaact gttcaaggaa gcctaccaga ttgcttgctt gggtgtcaca 1681 gacactgatt ggcgtgaact ggccatggaa gcgctagaag gtttagattt tgaaactgca 1741 aagaaggcct tcatcagagt acaagacctc cgatatttag agctcatcag cagcattgag 1801 gagaggaaga agcggggaga gaccaacaat gacctgtttc tggcagatgt gttttcctac 1861 caggggaagt tccatgaggc cgccaaactg tacaagagga gtgggcacga gaacctcgcg 1921 cttgaaatgt acaccgacct ctgcatgttt gagtatgcca aggatttcct tggatctgga 1981 gaccccaaag aaacaaagat gctaatcacc aaacaggctg actgggccag aaatatcaag 2041 gagcccaaag ccgccgtgga gatgtacatc tcagcaggag agcacgtcaa ggccatcgag 2101 atctgtggtg accatggctg ggttgacatg ttgatcgaca tcgcccgcaa actggacaag 2161 gctgagcgcg agcccctgct gctgtgcgct acctacctca agaagctgga cagccctggc 2221 tatgctgctg agacctacct gaagatgggt gacctcaagt ccctggtgca gctgcacgtg 2281 gagacccagc gctgggatga ggcctttgct ttgggtgaga agcatcctga gtttaaggat 2341 gacatctaca tgccgtatgc tcagtggcta gcagagaacg atcgctttga ggaagcccag 2401 aaagcgttcc acaaggctgg gcgacagaga gaagcggtcc aggtgctgga gcagctcaca 2461 aacaatgccg tggcggagag caggtttaat gatgctgcct attattactg gatgctgtcc 2521 atgcagtgcc tcgatatagc tcaagcagat cctgcccaga aggacacaat gcttggcaag 2581 ttctaccact tccagcgttt ggcagagctg taccatggtt accatgccat ccatcgccac 2641 acggaagatc cgttcagtgt ccatcgtcct gaaactcttt tcaacatctc caggttcctg 2701 ctgcacagcc tgcccaagga caccccctcg ggcatctcta aagtgaaaat actcttcacc 2761 ttggccaagc agagcaaggc cctcggtgcc tacaggctgg cccggcacgc ctatgacaag 2821 ctgcgtggcc tgtacatccc tgccagattc caaaagtcca ttgagctggg taccctgacc 2881 atccgcgcca agcccttcca cgacagtgag gagttggtgc ccttgtgcta ccgctgctcc 2941 accaacaacc cgctgctcaa caacctgggc aacgtctgca tcaactgccg ccagcccttc 3001 atcttctccg cctcttccta cgacgtgcta cacctggttg agttctacct ggaggaaggg 3061 atcactgatg aagaagccat ctccctcatc gacctggagg tgctgagacc caagcgggat 3121 gacagacagc tagagattgc aaacaacagc tcccagattc tgcggctagt ggagaccaag 3181 gactccatcg gagatgagga cccgttcaca gctaagctga gctttgagca aggtggctca 3241 gagttcgtgc cagtggtggt gagccggctg gtgctgcgct ccatgagccg ccgggatgtc 3301 ctcatcaagc gatggccccc acccctgagg tggcaatact tccgctcact gctgcctgac 3361 gcctccatta ccatgtgccc ctcctgcttc cagatgttcc attctgagga ctatgagttg 3421 ctggtgcttc agcatggctg ctgcccctac tgccgcaggt gcaaggatga ccctggccca 3481 tgaccagcat cctggggacg gcctgcaccc tctgcccgcc ttggggtctg ctgggctgtg 3541 aaggagaata aagagttaaa ctgtcaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaa //