LOCUS BC003037 1438 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens WD repeat domain 45, mRNA (cDNA clone MGC:4360
IMAGE:2822742), complete cds.
ACCESSION BC003037
VERSION BC003037.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1438)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1438)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-FEB-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 9 Row: n Column: 21
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 47059041.
FEATURES Location/Qualifiers
source 1..1438
/db_xref="H-InvDB:HIT000031378"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:4360 IMAGE:2822742"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1438
/gene="WDR45"
/gene_synonym="JM5"
/gene_synonym="WIPI-4"
/gene_synonym="WIPI4"
/db_xref="GeneID:11152"
/db_xref="HGNC:HGNC:28912"
/db_xref="MIM:300526"
CDS 167..1249
/gene="WDR45"
/gene_synonym="JM5"
/gene_synonym="WIPI-4"
/gene_synonym="WIPI4"
/codon_start=1
/product="WD repeat domain 45"
/protein_id="AAH03037.1"
/db_xref="GeneID:11152"
/db_xref="HGNC:HGNC:28912"
/db_xref="MIM:300526"
/translation="MTQQPLRGVTSLRFNQDQSCFCCAMETGVRIYNVEPLMEKGHLD
HEQVGSMGLVEMLHRSNLLALVGGGSSPKFSEISVLIWDDAREGKDSKEKLVLEFTFT
KPVLSVRMRHDKIVIVLKNRIYVYSFPDNPRKLFEFDTRDNPKGLCDLCPSLEKQLLV
FPGHKCGSLQLVDLASTKPGTSSAPFTINAHQSDIACVSLNQPGTVVASASQKGTLIR
LFDTQSKEKLVELRRGTDPATLYCINFSHDSSFLCASSDKGTVHIFALKDTRLNRRSA
LARVGKVGPMIGQYVDSQWSLASFTVPAESACICAFGRNTSKNVNSVIAICVDGTFHK
YVFTPDGNCNREAFDVYLDICDDDDF"
BASE COUNT 331 a 408 c 407 g 292 t
ORIGIN
1 agggcctgat gtaaacaccc gagccgggct ccaaggcccg ggaggtcaga aaaccgggcc
61 gcgggcggca ccgacagctg gggcccgggt cagggacacg cggaggtcag gccggtgaag
121 gcggcaggaa gctggagcac gatcccagga ggaacaatcc tgcaccatga ctcaacagcc
181 acttcgagga gtgaccagcc tgcgtttcaa ccaagaccaa agctgctttt gctgcgccat
241 ggagacaggt gtgcgcatct acaacgtgga gcccttgatg gagaaggggc atctggacca
301 cgagcaggtg ggcagcatgg gcttggtgga gatgctgcac cgctccaacc ttctggcctt
361 ggtgggcggt ggtagtagtc ccaagttctc agagatctca gtgctgatct gggacgatgc
421 ccgggagggc aaggactcca aggagaagct ggtgctggag ttcaccttca ccaagccagt
481 gctttctgtg cgcatgcgcc atgacaagat cgtgatcgtg ctgaagaacc gcatctatgt
541 gtactccttc cccgacaatc cccgaaagct gtttgagttt gatacccggg acaaccccaa
601 ggggctctgt gacctctgcc ccagcctgga gaagcaactg ctagtgttcc cgggacacaa
661 gtgtgggagt ctgcaacttg tggacctggc gagcacaaag cctggcacct cgtctgctcc
721 attcacgatc aatgcacatc agagtgacat agcctgtgtg tctctaaacc agccaggcac
781 tgtagtggcc tcagcctccc agaagggtac ccttattcgc ctctttgaca cacaatccaa
841 ggagaaactg gtggagctgc gccgaggcac tgaccctgcc accctctact gcattaactt
901 cagccacgac tcctccttcc tctgcgcttc cagtgataag ggtactgtcc atatctttgc
961 tctcaaggat acccgcctca accgccgctc cgcgctggct cgcgtgggca aggtggggcc
1021 tatgattggg cagtacgtgg actctcagtg gagcctggcg agcttcactg tgcctgctga
1081 gtcagcttgc atctgcgcct tcggtcgcaa tacttccaag aacgtcaact ctgtcattgc
1141 catctgcgta gatgggacct tccacaaata tgtcttcact cctgatggaa actgcaacag
1201 agaggctttc gacgtgtacc ttgacatctg tgatgatgat gacttttaag gaccctgggg
1261 gctgtgctag ggacctgcag tggcagaact gcagagctga gccttggcag tggggcgtgc
1321 ttggaagcca ccagccagca agcattaatg gggctggtgc ccactttcca ctcagcagag
1381 ctatgtctaa ataaagagct cacttccccc cagcaaaaaa aaaaaaaaaa aaaaaaaa
//