LOCUS BC003014 1057 bp mRNA linear HUM 03-OCT-2003 DEFINITION Homo sapiens nth endonuclease III-like 1 (E. coli), mRNA (cDNA clone MGC:4044 IMAGE:2821314), complete cds. ACCESSION BC003014 VERSION BC003014.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1057) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1057) AUTHORS Strausberg,R. TITLE Direct Submission JOURNAL Submitted (06-FEB-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: DCTD/DTP cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Steven Jones, Jennifer Asano, Ian Bosdet, Yaron Butterfield, Susanna Chan, Readman Chiu, Chris Fjell, Erin Garland, Ran Guin, Letticia Hsiao, Martin Krzywinski, Reta Kutsche, Oliver Lee, Soo Sen Lee, Victor Ling, Carrie Mathewson, Candice McLeavy, Steven Ness, Pawan Pandoh, Anna-Liisa Prabhu, Parvaneh Saeedi, Jacqueline Schein, Duane Smailus, Michael Smith, Lorraine Spence, Jeff Stott, Michael Thorne, Miranada Tsai, Natasja van den Bosch, Jill Vardy, George Yang, Scott Zuyderduyn, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 9 Row: h Column: 5. FEATURES Location/Qualifiers source 1..1057 /db_xref="H-InvDB:HIT000031361" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:4044 IMAGE:2821314" /tissue_type="Lung, small cell carcinoma" /clone_lib="NIH_MGC_7" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..1057 /gene="NTHL1" /gene_synonym="NTH1" /gene_synonym="OCTS3" /db_xref="GeneID:4913" /db_xref="MIM:602656" CDS 4..918 /gene="NTHL1" /gene_synonym="NTH1" /gene_synonym="OCTS3" /codon_start=1 /product="NTHL1 protein" /protein_id="AAH03014.1" /db_xref="GeneID:4913" /db_xref="MIM:602656" /translation="MTALSARMLTRSRSLGPGAGPRGCREEPGPLRRREAAAEARKSH SPVKRPRKAQRLRVAYEGSDSEKGEGAEPLKVPVWEPQDWQQQLVNIRAMRNKKDAPV DHLGTEHCYDSSAPPKVRRYQVLLSLMLSSQTKDQVTAGAMQRLRARGLTVDSILQTD DATLGKLIYPVGFWRSKVKYIKQTSAILQQHYGGDIPASVAELVALPGVGPKMAHLAM AVAWGTVSGIAVDTHVHRIANRLRWTKKATKSPEETRAALEEWLPRELWHEINGLLVG FGQQTCLPVHPRCHACLNQALCPAAQGL" misc_feature 364..909 /gene="NTHL1" /gene_synonym="NTH1" /gene_synonym="OCTS3" /note="Nth; Region: Predicted EndoIII-related endonuclease [DNA replication, recombination, and repair]" /db_xref="CDD:COG0177" BASE COUNT 240 a 300 c 352 g 165 t ORIGIN 1 ggcatgaccg ccttgagcgc gaggatgctg acccggagcc ggagcctggg acccggggct 61 gggccgcggg ggtgtaggga ggagcccggg cctctccgga gaagagaggc tgcagcagaa 121 gcgaggaaaa gccacagccc cgtgaagcgt ccgcggaaag cacagagact gcgtgtggcc 181 tatgagggct cggacagtga gaaaggtgag ggggctgagc ccctcaaggt gccagtctgg 241 gagccccagg actggcagca acagctggtc aacatccgtg ccatgaggaa caaaaaggat 301 gcacctgtgg accatctggg gactgagcac tgctatgact ccagtgcccc cccaaaggta 361 cgcaggtacc aggtgctgct gtcactgatg ctctccagcc aaaccaaaga ccaggtgacg 421 gcgggcgcca tgcagcgact gcgggcgcgg ggcctgacgg tggacagcat cctgcagaca 481 gatgatgcca cgctgggcaa gctcatctac cccgtcggtt tctggaggag caaggtgaaa 541 tacatcaagc agaccagcgc catcctgcag cagcactacg gtggggacat cccagcctct 601 gtggccgagc tggtggcgct gccgggtgtt gggcccaaga tggcacacct ggctatggct 661 gtggcctggg gcactgtgtc aggcattgca gtggacacgc atgtgcacag aatcgccaac 721 aggctgaggt ggaccaagaa ggcaaccaag tccccagagg agacccgcgc cgccctggag 781 gagtggctgc ctagggagct gtggcacgag atcaatggac tcttggtggg cttcggccag 841 cagacctgtc tgcctgtgca ccctcgctgc cacgcctgcc tcaaccaagc cctctgcccg 901 gccgcccagg gtctctgatg gccgcatggc tctggccgag gtgccgctgt ggccaccgtc 961 tgtgaagtgg ctttacgctt caggaagcca cgcctgttga ataaagcttt ggtgtgtttg 1021 cagatggaaa aaaaaaaaaa aaaaaaaaaa aaaaaaa //