LOCUS BC003013 1043 bp mRNA linear HUM 30-DEC-2006
DEFINITION Homo sapiens mRNA turnover 4 homolog (S. cerevisiae), mRNA (cDNA
clone MGC:4041 IMAGE:2821148), complete cds.
ACCESSION BC003013
VERSION BC003013.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1043)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1043)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-FEB-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 9 Row: p Column: 3
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 18490986.
FEATURES Location/Qualifiers
source 1..1043
/db_xref="H-InvDB:HIT000031360"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:4041 IMAGE:2821148"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1043
/gene="MRT4"
/gene_synonym="dJ657E11.4"
/db_xref="GeneID:51154"
/db_xref="HGNC:HGNC:18477"
CDS 30..749
/gene="MRT4"
/gene_synonym="dJ657E11.4"
/codon_start=1
/product="mRNA turnover 4 homolog (S. cerevisiae)"
/protein_id="AAH03013.1"
/db_xref="GeneID:51154"
/db_xref="HGNC:HGNC:18477"
/translation="MPKSKRDKKVSLTKTAKKGLELKQNLIEELRKCVDTYKYLFIFS
VANMRNSKLKDIRNAWKHSRMFFGKNKVMMVALGRSPSDEYKDNLHQVSKRLRGEVGL
LFTNRTKEEVNEWFTKYTEMDYARAGNKAAFTVSLDPGPLEQFPHSMEPQLRQLGLPT
ALKRGVVTLLSDYEVCKEGDVLTPEQARVLKLFGYEMAEFKVTIKYMWDSQSGRFQQM
GDDLPESASESTEESDSEDDD"
BASE COUNT 297 a 252 c 294 g 200 t
ORIGIN
1 cgtcttccgc cgcacgtgga ttcagcgcga tgcccaaatc caagcgcgac aagaaagtct
61 ccttaaccaa aactgccaag aaaggcttgg aattgaaaca aaacctgata gaagagcttc
121 ggaaatgtgt ggacacctac aagtaccttt tcatcttctc tgtggccaac atgaggaaca
181 gcaagctgaa ggacatccgg aacgcctgga agcacagccg gatgttcttt ggcaaaaaca
241 aggtgatgat ggtggccttg ggtcggagcc catctgatga atacaaagac aacctgcacc
301 aggtcagcaa aaggttgagg ggtgaggtgg gtctcctgtt caccaaccgc acaaaggaag
361 aggtgaatga gtggttcacg aaatacacag aaatggacta cgcccgagct ggtaacaaag
421 cagctttcac tgtgagcctg gatccagggc ccctggagca gttcccccac tccatggagc
481 cacagctcag gcagctgggc ctgcccaccg ccctcaagag aggtgtggtg actctgctgt
541 ctgactacga ggtgtgcaag gagggcgatg tgctgacccc agagcaggct cgcgtcctga
601 agctttttgg gtatgagatg gctgaattca aggtgaccat caaatacatg tgggattcac
661 agtcgggaag gttccagcag atgggagacg acttgccaga gagcgcatct gagtccacag
721 aagagtcaga ctcagaagat gatgactgaa agggactcgg gactgaaggt ctcctggaag
781 cttctgggtc tcactggacc atcaggactg ctgccgcccc tctggagaga gcagcttttt
841 atttgtctgt agacagggaa catgatgggc actgacctcc tgtaaagaat aaaactgtgg
901 gccgggcgcg gtggctcacg cctggaatcc cagcactttg ggaagccgag gtgggcagat
961 cataaggtca ggagattaag accatcctgg ctaacacggt gaaaccccgt ctctactaaa
1021 aaaaaaaaaa aaaaaaaaaa aaa
//