LOCUS BC002993 1746 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens RuvB-like 1 (E. coli), mRNA (cDNA clone MGC:3762
IMAGE:2823568), complete cds.
ACCESSION BC002993
VERSION BC002993.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1746)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1746)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-FEB-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 9 Row: k Column: 14
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4506752.
FEATURES Location/Qualifiers
source 1..1746
/db_xref="H-InvDB:HIT000031341"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:3762 IMAGE:2823568"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1746
/gene="RUVBL1"
/gene_synonym="ECP54"
/gene_synonym="NMP238"
/gene_synonym="RVB1"
/gene_synonym="TIP49"
/gene_synonym="TIP49A"
/db_xref="GeneID:8607"
/db_xref="HGNC:HGNC:10474"
/db_xref="MIM:603449"
CDS 72..1442
/gene="RUVBL1"
/gene_synonym="ECP54"
/gene_synonym="NMP238"
/gene_synonym="RVB1"
/gene_synonym="TIP49"
/gene_synonym="TIP49A"
/codon_start=1
/product="RuvB-like 1 (E. coli)"
/protein_id="AAH02993.1"
/db_xref="GeneID:8607"
/db_xref="HGNC:HGNC:10474"
/db_xref="MIM:603449"
/translation="MKIEEVKSTTKTQRIASHSHVKGLGLDESGLAKQAASGLVGQEN
AREACGVIVELIKSKKMAGRAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVY
STEIKKTEVLMENFRRAIGLRIKETKEVYEGEVTELTPCETENPMGGYGKTISHVIIG
LKTAKGTKQLKLDPSIFESLQKERVEAGDVIYIEANSGAVKRQGRCDTYATEFDLEAE
EYVPLPKGDVHKKKEIIQDVTLHDLDVANARPQGGQDILSMMGQLMKPKKTEITDKLR
GEINKVVNKYIDQGIAELVPGVLFVDEVHMLDIECFTYLHRALESSIAPIVIFASNRG
NCVIRGTEDITSPHGIPLDLLDRVMIIRTMLYTPQEMKQIIKIRAQTEGINISEEALN
HLGEIGTKTTLRYSVQLLTPANLLAKINGKDSIEKEHVEEISELFYDAKSSAKILADQ
QDKYMK"
BASE COUNT 479 a 403 c 479 g 385 t
ORIGIN
1 aactcaggcg ccgggcgcac tgtcctagct gctggttttc cacgctggtt ttagctcccg
61 gcgtctgcaa aatgaagatt gaggaggtga agagcactac gaagacgcag cgcatcgcct
121 cccacagcca cgtgaaaggg ctggggctgg acgagagcgg cttggccaag caggcggcct
181 cagggcttgt gggccaggag aacgcgcgag aggcatgtgg cgtcatagta gaattaatca
241 aaagcaagaa aatggctgga agagctgtct tgttggcagg acctcctgga actggcaaga
301 cagctctggc tctggctatt gctcaggagc tgggtagtaa ggtccccttc tgcccaatgg
361 tggggagtga agtttactca actgagatca agaagacaga ggtgctgatg gagaacttcc
421 gcagggccat tgggctgcga ataaaggaga ccaaggaagt ttatgaaggt gaagtcacag
481 agctaactcc gtgtgagaca gagaatccca tgggaggata tggcaaaacc attagccatg
541 tgatcatagg actcaaaaca gccaaaggaa ccaaacagtt gaaactggac cccagcattt
601 ttgaaagttt gcagaaagag cgagtagaag ctggagatgt gatttacatt gaagccaaca
661 gtggggccgt gaagaggcag ggcaggtgtg atacctatgc cacagaattc gaccttgaag
721 ctgaagagta tgtccccttg ccaaaagggg atgtgcacaa aaagaaagaa atcatccaag
781 atgtgacctt gcatgacttg gatgtggcta atgcgcggcc ccagggggga caagatatcc
841 tgtccatgat gggccagcta atgaagccaa agaagacaga aatcacagac aaacttcgag
901 gggagattaa taaggtggtg aacaagtaca tcgaccaggg cattgctgag ctggtcccgg
961 gtgtgctgtt tgttgatgag gtccacatgc tggacattga gtgcttcacc tacctgcacc
1021 gcgccctgga gtcttctatc gctcccatcg tcatctttgc atccaaccga ggcaactgtg
1081 tcatcagagg cactgaggac atcacatccc ctcacggcat ccctcttgac cttctggacc
1141 gagtgatgat aatccggacc atgctgtata ctccacagga aatgaaacag atcattaaaa
1201 tccgtgccca gacggaagga atcaacatca gtgaggaggc actgaaccac ctgggggaga
1261 ttggcaccaa gaccacactg aggtactcag tgcagctgct gaccccggcc aacttgcttg
1321 ctaaaatcaa cgggaaggac agcattgaga aagagcatgt cgaagagatc agtgaacttt
1381 tctatgatgc caagtcctcc gccaaaatcc tggctgacca gcaggataag tacatgaagt
1441 gagatggctg aggttttcag cagtaagaga ctccccaggt gtgcctggcc tgggtccagc
1501 ctgtgggcgc ttgcccctgg gcttggggct gccgtcccca ctcaggcgtg gtctgcagcg
1561 ctgtcagttc agtgtggaaa gcatttcttt ttaagttatc gtaactgttc ctgtggttgc
1621 tttgaaagaa cccttcctta cctggtgtgt tttctataaa tcttcatagg ttattttgat
1681 tctctctctc tctctctcta agttttttaa aaataaactt ttcagaacaa aaaaaaaaaa
1741 aaaaaa
//