LOCUS BC002979 977 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens proteasome (prosome, macropain) subunit, alpha type, 6, mRNA (cDNA clone MGC:2333 IMAGE:3542966), complete cds. ACCESSION BC002979 VERSION BC002979.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 977) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 977) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (06-FEB-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Louis M. Staudt, M.D., Ph.D. cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 8 Row: a Column: 10 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 23110943. FEATURES Location/Qualifiers source 1..977 /db_xref="H-InvDB:HIT000031331" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:2333 IMAGE:3542966" /tissue_type="Lymph, Burkitt lymphoma" /clone_lib="NIH_MGC_8" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..977 /gene="PSMA6" /gene_synonym="IOTA" /gene_synonym="MGC22756" /gene_synonym="MGC2333" /gene_synonym="MGC23846" /gene_synonym="p27K" /gene_synonym="PROS27" /db_xref="GeneID:5687" /db_xref="HGNC:HGNC:9535" /db_xref="MIM:602855" CDS 52..792 /gene="PSMA6" /gene_synonym="IOTA" /gene_synonym="MGC22756" /gene_synonym="MGC2333" /gene_synonym="MGC23846" /gene_synonym="p27K" /gene_synonym="PROS27" /codon_start=1 /product="proteasome (prosome, macropain) subunit, alpha type, 6" /protein_id="AAH02979.1" /db_xref="GeneID:5687" /db_xref="HGNC:HGNC:9535" /db_xref="MIM:602855" /translation="MSRGSSAGFDRHITIFSPEGRLYQVEYAFKAINQGGLTSVAVRG KDCAVIVTQKKVPDKLLDSSTVTHLFKITENIGCVMTGMTADSRSQVQRARYEAANWK YKYGYEIPVDMLCKRIADISQVYTQNAEMRPLGCCMILIGIDEEQGPQVYKCDPAGYY CGFKATAAGVKQTESTSFLEKKVKKKFDWTFEQTVETAITCLSTVLSIDFKPSEIEVG VVTVENPKFRILTEAEIDAHLVALAERD" BASE COUNT 310 a 190 c 224 g 253 t ORIGIN 1 gcgggagcta cggggcccag ggattgtgtt taaagtagtg cttctaccaa catgtcccgt 61 ggttccagcg ccggttttga ccgccacatt accatttttt cacccgaggg tcggctctac 121 caagtagaat atgcttttaa ggctattaac cagggtggcc ttacatcagt agctgtcaga 181 gggaaagact gtgcagtaat tgtcacacag aagaaagtac ctgacaaatt attggattcc 241 agcacagtga ctcacttatt caagataact gaaaacattg gttgtgtgat gaccggaatg 301 acagctgaca gcagatccca ggtacagagg gcacgctatg aggcagctaa ctggaaatac 361 aagtatggct atgagattcc tgtggacatg ctgtgtaaaa gaattgccga tatttctcag 421 gtctacacac agaatgctga aatgaggcct cttggttgtt gtatgatttt aattggtata 481 gatgaagagc aaggccctca ggtatataag tgtgatcctg caggttacta ctgtgggttt 541 aaagccactg cagcgggagt taaacaaact gagtcaacca gcttccttga aaaaaaagtg 601 aagaagaaat ttgattggac atttgaacag acagtggaaa ctgcaattac atgcctgtct 661 actgttctat caattgattt caaaccttca gaaatagaag ttggagtagt gacagttgaa 721 aatcctaaat tcaggattct tacagaagca gagattgatg ctcaccttgt tgctctagca 781 gagagagact aaacattgtc gttagtttac cagatccgtg atgccactta cctgtgtgtt 841 tggtaacaac aaaccaacat catggaggtc cctggattga aaaaggagcc tctcccactc 901 ctcctaccac cgaagtggtt aggactctat ataaataaaa acaaggcttt tggaaaataa 961 aaaaaaaaaa aaaaaaa //