LOCUS BC002956 1185 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens ClpP caseinolytic peptidase, ATP-dependent,
proteolytic subunit homolog (E. coli), mRNA (cDNA clone MGC:1379
IMAGE:3542292), complete cds.
ACCESSION BC002956
VERSION BC002956.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1185)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1185)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-FEB-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Louis M. Staudt, M.D., Ph.D.
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 8 Row: e Column: 4
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 53759125.
FEATURES Location/Qualifiers
source 1..1185
/db_xref="H-InvDB:HIT000031315"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:1379 IMAGE:3542292"
/tissue_type="Lymph, Burkitt lymphoma"
/clone_lib="NIH_MGC_8"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1185
/gene="CLPP"
/db_xref="GeneID:8192"
/db_xref="HGNC:HGNC:2084"
/db_xref="MIM:601119"
CDS 124..957
/gene="CLPP"
/codon_start=1
/product="ClpP caseinolytic peptidase, ATP-dependent,
proteolytic subunit homolog (E. coli)"
/protein_id="AAH02956.1"
/db_xref="GeneID:8192"
/db_xref="HGNC:HGNC:2084"
/db_xref="MIM:601119"
/translation="MWPGILVGGARVASCRYPALGPRLAAHFPAQRPPQRTLQNGLAL
QRCLHATATRALPLIPIVVEQTGRGERAYDIYSRLLRERIVCVMGPIDDSVASLVIAQ
LLFLQSESNKKPIHMYINSPGGVVTAGLAIYDTMQYILNPICTWCVGQAASMGSLLLA
AGTPGMRHSLPNSRIMIHQPSGGARGQATDIAIQAEEIMKLKKQLYNIYAKHTKQSLQ
VIESAMERDRYMSPMEAQEFGILDKVLVHPPQDGEDEPTLVQKEPVEAAPAAEPVPAS
T"
BASE COUNT 258 a 376 c 352 g 199 t
ORIGIN
1 ccttaatggc gcccgcccag actcctggaa gtgagcggcc tagcgagcga gctcccaggc
61 gcaaagcacg ccggaagctg tagttccgcc atcggacgga agccgaccgg ggcgtgcgga
121 gggatgtggc ccggaatatt ggtagggggg gcccgggtgg cgtcatgcag gtaccccgcg
181 ctggggcctc gcctcgccgc tcactttcca gcgcagcggc cgccgcagcg gacactccag
241 aacggcctgg ccctgcagcg gtgcctgcac gcgacggcga cccgggctct cccgctcatt
301 cccatcgtgg tggagcagac gggtcgcggc gagcgcgcct atgacatcta ctcgcggctg
361 ctgcgggagc gcatcgtgtg cgtcatgggc ccgatcgatg acagcgttgc cagccttgtt
421 atcgcacagc tcctcttcct gcaatccgag agcaacaaga agcccatcca catgtacatc
481 aacagccctg gtggtgtggt gaccgcgggc ctggccatct acgacacgat gcagtacatc
541 ctcaacccga tctgcacctg gtgcgtgggc caggccgcca gcatgggctc cctgcttctc
601 gccgccggca ccccaggcat gcgccactcg ctccccaact cccgtatcat gatccaccag
661 ccctcaggag gcgcccgggg ccaagccaca gacattgcca tccaggcaga ggagatcatg
721 aagctcaaga agcagctcta taacatctac gccaagcaca ccaaacagag cctgcaggtg
781 atcgagtccg ccatggagag ggaccgctac atgagcccca tggaggccca ggagtttggc
841 atcttagaca aggttctggt ccaccctccc caggacggtg aggatgagcc cacgctggtg
901 cagaaggagc ctgtagaagc agcgccggca gcagaacctg tcccagctag cacctgagag
961 ctgggcctcc tctccagaat catgtggagg ggccagaggc ctgccagacc cccagctggg
1021 ccctgctcac cccttgttgc tgggcttgga ggggcctctt gaggaacttt taatttgcag
1081 gggtgcccgc tatggacggg gcattccagc tgagacactg tgattttaaa ttaaatcttt
1141 gtggtcttta aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaa
//