LOCUS BC002946 1352 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens chromosome 1 open reading frame 89, mRNA (cDNA clone
MGC:10731 IMAGE:3955163), complete cds.
ACCESSION BC002946
VERSION BC002946.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1352)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1352)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-FEB-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 20, 2003 this sequence version replaced BC002946.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 15 Row: o Column: 16
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 34147392.
FEATURES Location/Qualifiers
source 1..1352
/db_xref="H-InvDB:HIT000031306"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:10731 IMAGE:3955163"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_20"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1352
/gene="C1orf89"
/gene_synonym="MGC10731"
/gene_synonym="RP4-733M16.4"
/db_xref="GeneID:79363"
/db_xref="HGNC:HGNC:28127"
CDS 210..986
/gene="C1orf89"
/gene_synonym="MGC10731"
/gene_synonym="RP4-733M16.4"
/codon_start=1
/product="chromosome 1 open reading frame 89"
/protein_id="AAH02946.1"
/db_xref="GeneID:79363"
/db_xref="HGNC:HGNC:28127"
/translation="MARPPVPGSVVVPNWHESAEGKEYLACILRKNRRRVFGLLERPV
LLPPVSIDTASYKIFVSGKSGVGKTALVAKLAGLEVPVVHHGTTGIQTTVVFWPAKLQ
ASSRVVMFRFEFWDCGESALKKFDHMLLACMENTDAFLFLFSFTDRASFEDLPGQLAR
IAGEAPGVVRMVIGSKFDQYMHTDVPERDLTAFRQAWELPLLRVKSVPGRRLADGRTL
DGRAGLADVAHILNGLAEQLWHQDQVAAGLLPNPPESAPE"
BASE COUNT 267 a 394 c 420 g 271 t
ORIGIN
1 ataccctcca tgggcagtaa tgggatgact atccccaggg agcattgcga aggagagagg
61 cggctgaggg actgcacttt ctggggcccc ccgggagagt cagagggcag ttaagaggga
121 tcacaggccc ggcttggtac tgtcactccc cttcccactc cctgctctca gcattctgtc
181 acctccctac cccgtcgcgg tgcccagcca tggccagacc tcccgtgccc ggttcggtgg
241 ttgtcccaaa ctggcacgag agtgccgagg gcaaggagta cctggcttgc attctgcgca
301 agaaccgccg gcgggtgttt gggctgcttg agcggccagt gctgctgccg cctgtgtcca
361 ttgacactgc cagctacaag atctttgtgt ccgggaagag tggtgtgggc aagacggcgc
421 tggtggccaa gctggctggc ctggaggtgc ctgtggtgca ccacgggacc accggcatcc
481 agaccaccgt ggtattttgg ccagccaagc tgcaggccag cagccgtgtc gtcatgtttc
541 gttttgagtt ctgggactgt ggagagtctg cactcaaaaa gttcgatcat atgctgctgg
601 cttgcatgga gaacacagat gccttcctct tcctcttctc cttcactgac cgtgcctcct
661 ttgaagacct ccctggacag ctggcccgca tagcaggtga ggcccctggt gtcgtcagga
721 tggtcatcgg ctccaaattt gaccagtaca tgcacacgga cgtgcccgag cgggacctca
781 cagccttccg gcaggcctgg gagctgcccc tgctacgggt gaagagtgtg ccggggcggc
841 ggctggctga tgggcgcaca ctggacgggc gggctgggct ggccgacgtt gcccacatac
901 tcaatggcct tgctgagcag ctgtggcacc aggaccaggt ggcggctggc ctgcttccca
961 accccccaga gagtgctcct gaatgagtca cgagtggttg cctgtgatcc cacccccaac
1021 cctcaggtct cgacataggg ctggaggctg gggcaggaac atggatccta tctggaggac
1081 tggccagcat ggcctgatca gggaggatgt ggccagagaa ggcccacccg cgagcagcgc
1141 tttccttgca gaattcatgg cagggaggtg gggaccaagg ccctgagctc gaacatctcc
1201 cgtggccttt ccccctttgg cagcaccgat ggaggatgac tgggagaggg ggtgcctctc
1261 aagttacttc aatcaagaac ctgtattggt tgaggtgaca ccatctgttg taacagataa
1321 accccgaaat cccaaaaaaa aaaaaaaaaa aa
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