LOCUS BC002937 2918 bp mRNA linear HUM 11-SEP-2007
DEFINITION Homo sapiens paroxysmal nonkinesigenic dyskinesia, mRNA (cDNA clone
MGC:10635 IMAGE:3956630), complete cds.
ACCESSION BC002937
VERSION BC002937.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2918)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2918)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-FEB-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Nov 6, 2003 this sequence version replaced BC002937.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 15 Row: k Column: 22.
FEATURES Location/Qualifiers
source 1..2918
/db_xref="H-InvDB:HIT000031300"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:10635 IMAGE:3956630"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_21"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2918
/gene="PNKD"
/gene_synonym="BRP17"
/gene_synonym="DKFZp564N1362"
/gene_synonym="DYT8"
/gene_synonym="FKSG19"
/gene_synonym="FPD1"
/gene_synonym="KIPP1184"
/gene_synonym="MR-1"
/gene_synonym="MR1"
/gene_synonym="PDC"
/gene_synonym="TAHCCP2"
/db_xref="GeneID:25953"
/db_xref="HGNC:HGNC:9153"
/db_xref="MIM:609023"
CDS 1..1086
/gene="PNKD"
/gene_synonym="BRP17"
/gene_synonym="DKFZp564N1362"
/gene_synonym="DYT8"
/gene_synonym="FKSG19"
/gene_synonym="FPD1"
/gene_synonym="KIPP1184"
/gene_synonym="MR-1"
/gene_synonym="MR1"
/gene_synonym="PDC"
/gene_synonym="TAHCCP2"
/codon_start=1
/product="paroxysmal nonkinesigenic dyskinesia"
/protein_id="AAH02937.1"
/db_xref="GeneID:25953"
/db_xref="HGNC:HGNC:9153"
/db_xref="MIM:609023"
/translation="MAWQGWPAAWQWVAGCWLLLVLVLVLLVSPRGCRARRGLRGLLM
AHSQRLLFRIGYSLYTRTWLGYLFYRQQLRRARNRYPKGHSKTQPRLFNGVKVLPIPV
LSDNYSYLIIDTQAQLAVAVDPSDPRAVQASIEKEGVTLVAILCTHKHWDHSGGNRDL
SRRHRDCRVYGSPQDGIPYLTHPLCHQDVVSVGRLQIRALATPGHTQGHLVYLLDGEP
YKGPSCLFSGDLLFLSGCGRTFEGNAETMLSSLDTVLGLGDDTLLWPGHEYAEENLGF
AGVVEPENLARERKMQWVQRQRLERKGTCPSTLGEERSYNPFLRTHCLALQEALGPGP
GPTGDDDYSRAQLLEELRRLKDMHKSK"
BASE COUNT 554 a 960 c 766 g 638 t
ORIGIN
1 atggcttggc agggctggcc cgcggcgtgg cagtgggtcg ccggctgctg gctcctcctc
61 gtccttgtcc tcgtcctact tgtgagcccc cgcggctgcc gagcgcggcg gggcctccgc
121 ggtctgctca tggcgcacag ccagcggctg ctcttccgaa tcgggtacag cctgtacacc
181 cgcacctggc tcgggtacct cttctaccga cagcagctgc gcagggctcg gaatcgctac
241 cctaaaggcc actcgaaaac ccagccccgc ctcttcaatg gagtgaaggt gcttcccatc
301 cctgtcctct cggacaacta cagctacctc atcatcgaca cccaggccca gctggctgtg
361 gctgtggacc cttcagaccc tcgggctgtg caggcttcca ttgaaaagga aggggtcacc
421 ttggtcgcca ttctgtgtac tcacaagcac tgggaccaca gtggagggaa ccgtgacctc
481 agccggcggc accgggactg tcgggtgtac gggagccctc aggacggcat cccctacctc
541 acccatcccc tgtgtcatca agatgtggtc agcgtgggac ggcttcagat ccgggccctg
601 gctacacctg gccacacaca aggccatctg gtctacctac tggatgggga gccctacaag
661 ggtccctcct gcctcttctc aggggacctg ctcttcctct ctggctgtgg gcggaccttt
721 gagggcaatg cagagaccat gctgagctca ctggacactg tgctggggct aggggatgac
781 acccttctgt ggcctggtca tgagtatgca gaggagaacc tgggctttgc aggtgtggtg
841 gagcccgaga acctggcccg ggagaggaag atgcagtggg tgcagcggca gcggctggag
901 cgcaagggca cgtgcccatc taccctggga gaggagcgct cctacaaccc gttcctgaga
961 acccactgcc tggcgctaca ggaggctctg gggccggggc cgggccccac tggggatgat
1021 gactactccc gggcccagct cctggaagag ctccgccggc tgaaggatat gcacaagagc
1081 aagtgatgcc cccagcgccc ccagcccagc ccactccccg catggggagg ccgccaccac
1141 caacacctca tcatccttct catcgctaac accaccacct ccatcggcac ccaagcgggc
1201 atcatccccc cacactgctc aggggagggg agggatcagg cgatgagact gtgaggccaa
1261 aagaagcggg cctgttggag gctgggaacc ccgcagcgcg aggctgcctc atcaacggca
1321 agaggaaagg aggggtctcg ggacatctcc agaccctacc aactgggagg gtcccctcct
1381 ccttccctac tcctgggacg gcagcaagga catgggggct gctgttagct tctccgtcag
1441 gaggcctcat ctcactgtag ccctggaacc cagggtccat cttgcccttc ccccatccat
1501 ggttgggaaa gaagctcagc ccctcacagt ggcctcaagt gtgatgcctt acaaaagcac
1561 cactcagatg ggcagctgga ctctggtgtc ctgagactct gccctcttcc cacagcctcc
1621 ctgccccacc catccctgca aagccatttt tcagacagag ccattcctaa gaacactgaa
1681 gggctggaat gctggctggc cactctctgc ctcagtggcc tccctacagc ctggaagaag
1741 gagggtcctg attgccaagg aaacctcctc attgggctaa ggagacactg gagtctggag
1801 tgtggagccc cacagtcttg caggtcacat gctctccttg cacatctggc ctggttgtac
1861 ccactggcct ctgcctctgc cctgggccaa aagggcccct ccttgccagg ggagagacag
1921 ccacggtcct ctttggccga tgctgtattc tcattttggc ccttgttctt aggcccgtct
1981 gcccgccttc ctccatctaa cctttcctgt tttatccgca gcccttttct tctttgagtt
2041 agtaaagatt tattctgtaa cctgacactc atctggccct ttgcagtttg ccagccatat
2101 tcccatgtga tttcccactg gatccaggcc cccatccggc tggcaggagg gggctctgac
2161 gtgcaggttg gaaatcagaa gtctgtgaga gcgcgggagt gcatggcagc tctgggtccc
2221 agacctggcc cgacccctct gcttcacctc cagctctgct gctcctctac tcttgggtcg
2281 agatcccttt ggagccacag cgaggaaccc tgtggtcctc aggcaggtgt accttgagtc
2341 agccaggagc cctcttttcc tgtgtcaaag cctgccctcg ggctctgctc acctctggtg
2401 accctccaag atgcccctgc cctcagtttc ccctcatgat ctggcctctg cccccttctc
2461 tagccacagc ctctagtaca ctttagcaat accaccagac tagttagagt tccccactca
2521 ccaagcaaga catgcagttt catgcctctg tgccttcgct catgctgttt cttccgactg
2581 gaatgccttc ccctgctcct cctgccttgt ctgcctggca agttcatctc tcacgatccc
2641 ctcaaaggcc ccctcctcca ggaaggcaac ccctgtgccc ctcccctcca ggctacctct
2701 gcactttgtc aatgcttctc ttgtggcact tatcacactg tattttactt gtttacatgt
2761 ttgtctcccc ttctagactg tgaatcctta agggcatgga ctgtatctta tgcatctctg
2821 tatttctgcg cctagcacgg tgcctagcac acagtaggcg ctcaataaat gttgaatgaa
2881 tgaatgattt aatcaaaaaa aaaaaaaaaa aaaaaaaa
//