LOCUS BC002931 2578 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens CCR4-NOT transcription complex, subunit 10, mRNA (cDNA clone MGC:11369 IMAGE:3955575), complete cds. ACCESSION BC002931 VERSION BC002931.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2578) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2578) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (05-FEB-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Aug 20, 2003 this sequence version replaced BC002931.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC/DCTD/DTP cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 15 Row: i Column: 18 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 13123771. FEATURES Location/Qualifiers source 1..2578 /db_xref="H-InvDB:HIT000031296" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:11369 IMAGE:3955575" /tissue_type="Skin, melanotic melanoma." /clone_lib="NIH_MGC_20" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..2578 /gene="CNOT10" /gene_synonym="DKFZP434K115" /gene_synonym="FLJ12890" /gene_synonym="FLJ13165" /db_xref="GeneID:25904" /db_xref="HGNC:HGNC:23817" CDS 225..2459 /gene="CNOT10" /gene_synonym="DKFZP434K115" /gene_synonym="FLJ12890" /gene_synonym="FLJ13165" /codon_start=1 /product="CCR4-NOT transcription complex, subunit 10" /protein_id="AAH02931.1" /db_xref="GeneID:25904" /db_xref="HGNC:HGNC:23817" /translation="MAADKPADQGAEKHEGTGQSSGITDQEKELSTNAFQAFTSGNYD ACLQHLACLQDINKDDYKIILNTAVAEFFKSNQTTTDNLRQTLNQLKNQVHSAVEEMD GLDDVENSMLYYNQAVILYHLRQYTEAISVGEKLYQFIEPFEEKFAQAVCFLLVDLYI LTYQAEKALHLLAVLEKMISQGNNNKNGKNETGNNNNKDGSNHKAESGALIEAAKSKI HQYKVRAYIQMKSLKACKREIKSVMNTAGNSAPSLFLKSNFEYLRGNYRKAVKLLNSS NIAEHPGFMKTGECLRCMFWNNLGCIHFAMSKHNLGIFYFKKALQENDNVCAQLSAGS TDPGKKFSGRPMCTLLTNKRYELLYNCGIQLLHIGRPLAAFECLIEAVQVYHANPRLW LRLAECCIAANKGTSEQETKGLPSKKGIVQSIVGQGYHRKIVLASQSIQNTVYNDGQS SAIPVASMEFAAICLRNALLLLPEEQQDPKQENGAKNSNQLGGNTESSESSETCSSKS HDGDKFIPAPPSSPLRKQELENLKCSILACSAYVALALGDNLMALNHADKLLQQPKLS GSLKFLGHLYAAEALISLDRISDAITHLNPENVTDVSLGISSNEQDQGSDKGENEAME SSGKRAPQCYPSSVNSARTVMLFNLGSAYCLRSEYDKARKCLHQAASMIHPKEVPPEA ILLAVYLELQNGNTQLALQIIKRNQLLPAVKTHSEVRKKPVFQPVHPIQPIQMPAFTT VQRK" BASE COUNT 799 a 557 c 583 g 639 t ORIGIN 1 gtggcggtcc cttggtgggg aagctgttgc tgttgctaga cgacgggaac tagctctcgt 61 cacttcctca gcccgccgtc tgcccactcc tctagccgga acctgggggc ccggagccgg 121 ggtaggcaca gagttgtcct cggaggtcca ggacagcggc cagcccggcg gcgggagtca 181 gggccacgcc acctgcaggg aagaacccga gtcgaagcgg gaagatggct gcagacaagc 241 ctgcagatca gggagcagag aaacatgaag gcacaggtca gtcctctggg atcactgatc 301 aagagaagga gttatccacc aatgctttcc aagctttcac atctggaaat tatgatgcct 361 gtctacaaca ccttgcctgt ctacaagata taaacaaaga tgattataaa ataattttga 421 atacagcagt agctgagttt tttaaaagta accaaacaac aacagataat ttgagacaaa 481 cacttaacca gctgaagaat caggtccact cagctgttga agaaatggat ggattagatg 541 atgttgaaaa cagcatgttg tactataatc aagcagtcat tctttatcat ctgcggcagt 601 atacagaagc catatcagtt ggtgaaaaac tttatcagtt catagagcct tttgaagaaa 661 aatttgccca agcagtgtgt tttttgcttg tagacctgta tatattaacc taccaagctg 721 agaaagcttt gcatcttctt gctgtcctag aaaaaatgat ttcacagggt aacaataaca 781 aaaatggaaa gaatgagact ggtaataaca acaacaaaga tggatctaat cataaagctg 841 aaagtggagc tctaatagaa gctgcaaaat caaagataca tcagtacaaa gtacgagctt 901 atatccaaat gaagtctctg aaagcatgta aaagggaaat caagtcagtc atgaatacag 961 ctggaaattc cgcaccctct ctctttctta aaagcaattt tgagtactta agaggtaatt 1021 atcgaaaagc cgtgaagcta ttaaatagtt caaacattgc tgagcatcca ggattcatga 1081 aaacaggtga atgcttgaga tgcatgttct ggaataacct tggttgcatc cattttgcca 1141 tgagcaagca caatttggga atattctact ttaaaaaggc tctgcaagag aatgacaatg 1201 tctgtgcaca gctcagtgca ggtagcactg atccaggtaa aaaattttca ggaagaccca 1261 tgtgtacgtt actaaccaat aagagatatg agttgctgta taactgtgga attcagcttc 1321 ttcacattgg aaggcctctt gctgccttcg aatgtctgat tgaagctgtt caggtttatc 1381 atgcaaatcc tcgcctctgg ctacggctgg ctgaatgctg cattgctgcc aataagggga 1441 cttctgaaca agaaactaaa ggccttccca gcaaaaaagg aattgtacag tctattgttg 1501 gtcaaggcta tcatcgtaaa atagttttgg catcacagtc tatacagaat actgtttata 1561 atgatggtca gtcttcggcc attcctgtag ccagtatgga gtttgcagcc atatgtctca 1621 gaaatgcctt gttgctgcta cctgaagaac agcaagatcc aaagcaggaa aatggggcta 1681 aaaatagtaa tcaattaggt gggaacacag agagcagcga aagcagtgaa acttgcagca 1741 gtaaaagcca tgatggagat aaattcattc cagctccacc ttcttctcca ttgagaaaac 1801 aggaattaga aaacttaaag tgctccatac ttgcttgcag tgcctacgtg gctctggctt 1861 tgggtgataa cctcatggct ttgaatcatg cagataaact tcttcagcag cccaagctgt 1921 caggatctct taagtttttg ggacatttat atgctgcaga agccctcatc tctctcgaca 1981 gaatatctga tgccattact cacttgaacc cggagaatgt cactgatgtc tccttaggga 2041 tctcttcaaa tgagcaggac caaggatcag acaaaggtga aaatgaagca atggaatcct 2101 ctggtaagcg ggcccctcag tgctacccca gttccgtcaa ctctgccagg actgtgatgc 2161 tgttcaacct tggcagcgct tactgcctga ggagcgaata tgacaaagcc cgaaagtgtc 2221 tccaccaggc ggcttcaatg atccatccta aagaggtgcc ccctgaggcc atcttgctgg 2281 cagtctacct tgaactgcag aatggtaata ctcagctggc cttacagatc atcaaaagga 2341 atcagctgct ccctgcagtg aaaacacact ctgaagtgag aaagaagcca gtgtttcagc 2401 ctgtccaccc gatccagccc atccaaatgc cggctttcac cactgtgcag agaaagtgat 2461 acttcacttt tggaaaactg ttacctgaga cccaggggag aatttactgg ccattttagt 2521 tgtatcacag cagaatgaat aaaagatggt gaaggctgtt aaaaaaaaaa aaaaaaaa //