LOCUS BC002928 2495 bp mRNA linear HUM 23-DEC-2003
DEFINITION Homo sapiens CCR4-NOT transcription complex, subunit 10, mRNA (cDNA
clone MGC:11357 IMAGE:3954507), complete cds.
ACCESSION BC002928
VERSION BC002928.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2495)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2495)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (05-FEB-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC002928.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 15 Row: i Column: 12
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 13123771.
FEATURES Location/Qualifiers
source 1..2495
/db_xref="H-InvDB:HIT000031294"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:11357 IMAGE:3954507"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_20"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2495
/gene="CNOT10"
/gene_synonym="DKFZP434K115"
/gene_synonym="FLJ12890"
/gene_synonym="FLJ13165"
/db_xref="GeneID:25904"
CDS 219..2372
/gene="CNOT10"
/gene_synonym="DKFZP434K115"
/gene_synonym="FLJ12890"
/gene_synonym="FLJ13165"
/codon_start=1
/product="CNOT10 protein"
/protein_id="AAH02928.1"
/db_xref="GeneID:25904"
/translation="MAADKPADQGAEKHEGTGQSSGITDQEKELSTNAFQAFTSGNYD
ACLQHLACLQDINKDDYKIILNTAVAEFFKSNQTTTDNLRQTLNQLKNQVHSAVEEMD
GLDDVENSMLYYNQAVILYHLRQYTEAISVGEKLYQFIEPFEEKFAQAVCFLLVDLYI
LTYQAEKALHLLAVLEKMISQGNNNKNGKNETGNNNNKDGSNHKAESGALIEAAKSKI
HQYKVRAYIQMKSLKACKREIKSVMNTAGNSAPSLFLKSNFEYLRGNYRKAVKLLNSS
NIAEHPGFMKTGECLRCMFWNNLGCIHFAMSKHNLGIFYFKKALQENDNVCAQLSAGS
TDPGKKFSGRPMCTLLTNKRYELLYNCGIQLLHIGRPLAAFECLIEAVQVYHANPRLW
LRLAECCIAANKGTSEQETKGLPSKKGIVQSIVGQGYHRKIVLASQSIQNTVYNDGQS
SAIPVASMEFAAICLRNALLLLPEEQQDPKQENGAKNSNQLGGNTESSESSETCRCSI
LACSAYVALALGDNLMALNHADKLLQQPKLSGSLKFLGHLYAAEALISLDRISDAITH
LNPENVTDVSLGISSNEQDQGSDKGENEAMESSGKRAPQCYPSSVNSARTVMLFNLGS
AYCLRSEYDKARKCLHQAASMIHPKEVPPEAILLAVYLELQNGNTQLALQIIKRNQLL
PAVKTHSEVRKKPVFQPVHPIQPIQMSAFTTVQRK"
BASE COUNT 771 a 538 c 568 g 618 t
ORIGIN
1 gtcccttggt ggggaagctg ttgctgttgc tagacgacgg gaactagctc tcgtcacttc
61 ctcagcccgc cgtctgccca ctcctctagc cggaacctgg gggcccggag ccggggtagg
121 cacagagttg tcctcggagg tccaggacag cggccagccc ggcggcggga gtcagggcca
181 cgccacctgc agggaagaac ccgagtcgaa gcgggaagat ggctgcagac aagcctgcag
241 atcagggagc agagaaacat gaaggcacag gtcagtcctc tgggatcact gatcaagaga
301 aggagttatc caccaatgct ttccaagctt tcacatctgg aaattatgat gcctgtctac
361 aacaccttgc ctgtctacaa gatataaaca aagatgatta taaaataatt ttgaatacag
421 cagtagctga gttttttaaa agtaaccaaa caacaacaga taatttgaga caaacactta
481 accagctgaa gaatcaggtc cactcagctg ttgaagaaat ggatggatta gatgatgttg
541 aaaacagcat gttgtactat aatcaagcag tcattcttta tcatctgcgg cagtatacag
601 aagccatatc agttggtgaa aaactttatc agttcataga gccttttgaa gaaaaatttg
661 cccaagcagt gtgttttttg cttgtagacc tgtatatatt aacctaccaa gctgagaaag
721 ctttgcatct tcttgctgtc ctagaaaaaa tgatttcaca gggtaacaat aacaaaaatg
781 gaaagaatga gactggtaat aacaacaaca aagatggatc taatcataaa gctgaaagtg
841 gagctctaat agaagctgca aaatcaaaga tacatcagta caaagtacga gcttatatcc
901 aaatgaagtc tctgaaagca tgtaaaaggg aaatcaagtc agtcatgaat acagctggaa
961 attccgcacc ctctctcttt cttaaaagca attttgagta cttaagaggt aattatcgaa
1021 aagccgtgaa gctattaaat agttcaaaca ttgctgagca tccaggattc atgaaaacag
1081 gtgaatgctt gagatgcatg ttctggaata accttggttg catccatttt gccatgagca
1141 agcacaattt gggaatattc tactttaaaa aggctctgca agagaatgac aatgtctgtg
1201 cacagctcag tgcaggtagc actgatccag gtaaaaaatt ttcaggaaga cccatgtgta
1261 cgttactaac caataagaga tatgagttgc tgtataactg tggaattcag cttcttcaca
1321 ttggaaggcc tcttgctgcc ttcgaatgtc tgattgaagc tgttcaggtt tatcatgcaa
1381 atcctcgcct ctggctacgg ctggctgaat gctgcattgc tgccaataag gggacttctg
1441 aacaagaaac taaaggcctt cccagcaaaa aaggaattgt acagtctatt gttggtcaag
1501 gctatcatcg taaaatagtt ttggcatcac agtctataca gaatactgtt tataatgatg
1561 ggcagtcttc ggccattcct gtagccagta tggagtttgc agccatatgt ctcagaaatg
1621 ccttgttgct gctacctgaa gaacagcaag atccaaagca ggaaaatggg gctaaaaata
1681 gtaatcaatt aggtgggaac acagagagca gcgaaagcag tgaaacttgc aggtgctcca
1741 tacttgcttg cagtgcctac gtggctctgg ctttgggtga taacctcatg gctttgaatc
1801 atgcagataa acttcttcag cagcccaagc tgtcaggatc tcttaagttt ttgggacatt
1861 tatatgctgc agaagccctc atctctctcg acagaatatc tgatgccatt actcacttga
1921 acccggagaa tgtcactgat gtctccttag ggatctcttc aaatgagcag gaccaaggat
1981 cagacaaagg tgaaaatgaa gcaatggaat cctctggtaa gcgggcccct cagtgctacc
2041 ccagttccgt caactctgcc aggactgtga tgctgttcaa ccttggcagc gcttactgcc
2101 tgaggagcga atatgacaaa gcccgaaagt gtctccacca ggcggcttca atgatccatc
2161 ctaaagaggt gccccctgag gccatcttgc tggcagtcta ccttgaactg cagaatggta
2221 atactcagct ggccttacag atcatcaaaa ggaatcagct gctccctgca gtgaaaacac
2281 actctgaagt gagaaagaag ccagtgtttc agcctgtcca cccgatccag cccatccaaa
2341 tgtcggcttt caccactgtg cagagaaagt gatacttcac ttttggaaaa ctgttacctg
2401 agacccaggg gagaatttac tggccatttt agttgtatca cagcagaatg aataaaagat
2461 ggtgaaggct gttaaaaaaa aaaaaaaaaa aaaaa
//