LOCUS BC002868 1581 bp mRNA linear HUM 11-SEP-2007
DEFINITION Homo sapiens RNA binding motif protein 42, mRNA (cDNA clone
MGC:10433 IMAGE:3941786), complete cds.
ACCESSION BC002868
VERSION BC002868.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1581)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1581)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-FEB-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC002868.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 15 Row: c Column: 11
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 34147641.
FEATURES Location/Qualifiers
source 1..1581
/db_xref="H-InvDB:HIT000031252"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:10433 IMAGE:3941786"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1581
/gene="RBM42"
/db_xref="GeneID:79171"
/db_xref="HGNC:HGNC:28117"
CDS 78..1433
/gene="RBM42"
/codon_start=1
/product="RBM42 protein"
/protein_id="AAH02868.1"
/db_xref="GeneID:79171"
/db_xref="HGNC:HGNC:28117"
/translation="MAGAGPAPGLPGAGGPVVPGPGAGIPGKSGEERLKEMEAEMALF
EQEVLGAPVPGIPTAVPAVPTVPTVPTVEAMQVPAAPVIRPIIATNTYQQVQQTLEAR
AAAAATVVPPMVGGPPFVGPVGFGPGDRSHLDSPEAREAMFLRRAAAGPRPMALRPPH
QALVGPPLPGPPGPPMMLPPMARAPGPPLGSMAALRPPLEEPAAPRELGLGLGLGLKE
KEEAVVAAAAGLEEASAAVAVGAGGAPAGPAVIGPSLPLALAMPLPEPEPLPLPLEVV
RGLLPPLRIPELLSLRPRPRPPRPEPPPGLMALEVPEPLGEDKKKGKPEKLKRCIRTA
AGSSWEDPSLLEWDADDFRIFCGDLGNEVNDDILARAFSRFPSFLKAKVIRDKRTGKT
KGYGFVSFKDPSDYVRAMREMNGKYVGSRPIKLRKSMWKDRNLDVVRKKQKEKKKLGL
R"
BASE COUNT 308 a 508 c 508 g 257 t
ORIGIN
1 gggggagagt agacagcaga accagcggcg gcggctaagc agagactgta gtagcggcga
61 cagcgacgac ggcagcgatg gctggggcgg ggccagcccc gggactcccg ggtgcaggag
121 gacccgtggt cccgggtcct ggcgctggca tcccgggcaa aagcggcgag gaacgcttga
181 aggaaatgga ggcggagatg gccctgtttg agcaggaagt tctgggggct ccagtacctg
241 gaatcccaac tgctgtgcct gcggtgccca ctgtccccac ggtccccaca gtagaagcga
301 tgcaggtccc agcggctcct gtgatccgcc caattatcgc gaccaacaca taccagcagg
361 tccagcagac tctggaggcc cgagcagctg ctgcagccac agtagttcct cccatggtgg
421 gtggccctcc ttttgtaggc cctgttggct ttggccctgg tgatcggagt cacctggaca
481 gcccagaggc tcgagaagcc atgttcctgc ggcgggcagc agccggcccc cgccctatgg
541 ccctacggcc ccctcaccag gccctcgtgg gcccccctct gcctgggccc cctggaccac
601 ccatgatgct gccaccaatg gctcgggctc cagggccccc gctgggctcc atggctgcac
661 tgaggccccc tctggaagag ccagcagcac cccgagagct gggcctaggc ctggggttgg
721 gcctgaaaga gaaggaagag gcagtggtgg cggcggcggc tgggctggag gaggctagcg
781 cggctgtggc cgtgggggca ggaggtgccc cagctggccc tgcagtcatt gggcccagcc
841 tgccgctggc cctggccatg ccattgcccg agcctgagcc cctgcccctc ccgttggagg
901 tcgtccgcgg cctcctgccc ccgctgcgca ttcctgaact cctgtccctg cgtcctcggc
961 cccggccccc tcggccagag ccacccccag gcctcatggc tcttgaggtc ccagagcccc
1021 tgggtgaaga caagaagaag gggaagccag agaaattgaa acggtgcatt cgcacagcgg
1081 cagggagcag ctgggaggac cccagcctgc tggagtggga tgcagatgac ttccggatct
1141 tctgtgggga tctgggcaat gaggtgaacg atgacatctt ggcacgcgcc ttcagccgct
1201 tcccatcctt ccttaaggcc aaggtgatcc gtgacaagcg cacaggcaag accaagggct
1261 acggcttcgt cagcttcaag gaccccagcg actacgtgcg cgccatgcgt gagatgaatg
1321 ggaagtatgt gggctcgcgc cccatcaagc ttcgcaagag catgtggaag gaccggaatc
1381 tggacgtggt ccgcaagaag cagaaggaaa agaagaagct gggcctgaga tagggtctgt
1441 ggccaggcac ccgctcccac ctggccgggc gctggctcct ccctcagttc tctttggaaa
1501 acccccagct gtccacccat cccctgcccc aaaaccagtt tcaataaatt tacgttcatt
1561 tccaaaaaaa aaaaaaaaaa a
//