LOCUS BC002844 3016 bp mRNA linear HUM 07-NOV-2006
DEFINITION Homo sapiens nuclear factor of kappa light polypeptide gene
enhancer in B-cells 2 (p49/p100), mRNA (cDNA clone MGC:3685
IMAGE:3634575), complete cds.
ACCESSION BC002844
VERSION BC002844.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3016)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3016)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-FEB-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 20, 2003 this sequence version replaced BC002844.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Louis M. Staudt, M.D., Ph.D.
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 12 Row: n Column: 4
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 19923222.
FEATURES Location/Qualifiers
source 1..3016
/db_xref="H-InvDB:HIT000031234"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:3685 IMAGE:3634575"
/tissue_type="Lymph, Burkitt lymphoma"
/clone_lib="NIH_MGC_8"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..3016
/gene="NFKB2"
/gene_synonym="LYT-10"
/gene_synonym="LYT10"
/db_xref="GeneID:4791"
/db_xref="HGNC:HGNC:7795"
/db_xref="MIM:164012"
CDS 101..2800
/gene="NFKB2"
/gene_synonym="LYT-10"
/gene_synonym="LYT10"
/codon_start=1
/product="nuclear factor of kappa light polypeptide gene
enhancer in B-cells 2 (p49/p100)"
/protein_id="AAH02844.1"
/db_xref="GeneID:4791"
/db_xref="HGNC:HGNC:7795"
/db_xref="MIM:164012"
/translation="MESCYNPGLDGIIEYDDFKLNSSIVEPKEPAPETADGPYLVIVE
QPKQRGFRFRYGCEGPSHGGLPGASSEKGRKTYPTVKICNYEGPAKIEVDLVTHSDPP
RAHAHSLVGKQCSELGICAVSVGPKDMTAQFNNLGVLHVTKKNMMGTMIQKLQRQRLR
SRPQGLTEAEQRELEQEAKELKKVMDLSIVRLRFSAFLRASDGSFSLPLKPVISQPIH
DSKSPGASNLKISRMDKTAGSVRGGDEVYLLCDKVQKDDIEVRFYEDDENGWQAFGDF
SPTDVHKQYAIVFRTPPYHKMKIERPVTVFLQLKRKRGGDVSDSKQFTYYPLVEDKEE
VQRKRRKALPTFSQPFGGGSHMGGGSGGAAGGYGGAGGGGSLGFFPSSLAYSPYQSGA
GPMGCYPGGGGGAQMAATVPSRDSGEEAAEPSAPSRTPQCEPQAPEMLQRAREYNARL
FGLAQRSARALLDYGVTADARALLAGQRHLLTAQDENGDTPLHLAIIHGQTSVIEQIV
YVIHHAQDLGVVNLTNHLHQTPLHLAVITGQTSVVSFLLRVGADPALLDRHGDSAMHL
ALRAGAGAPELLRALLQSGAPAVPQLLHMPDFEGLYPVHLAVRARSPECLDLLVDSGA
EVEATERQGGRTALHLATEMEELGLVTHLVTKLRANVNARTFAGNTPLHLAAGLGYPT
LTRLLLKAGADIHAENEEPLCPLPSPPTSDSDSDSEGPEKDTRSSFRGHTPLDLTCST
KVKTLLLNAAQNTMEPPLTPPSPAGPGLSLGDTALQNLEQLLDGPEAQGSWAELAERL
GLRSLVDTYRQTTSPSGSLLRSYELAGGDLAGLLEALSDMGLEEGVRLLRGPETRDKL
PSTEVKEDSAYGSQSVEQEAEKLGPPPEPPGGLCHGHPQPQVH"
BASE COUNT 706 a 900 c 902 g 508 t
ORIGIN
1 agaagccgca accagagccg ccgccacggc gggcgtctaa aattctggga agcagaacct
61 ggccggagcc actagacaga gccgggccta gcccagagac atggagagtt gctacaaccc
121 aggtctggat ggtattattg aatatgatga tttcaaattg aactcctcca ttgtggaacc
181 caaggagcca gccccagaaa cagctgatgg cccctacctg gtgatcgtgg aacagcctaa
241 gcagagaggc ttccgatttc gatatggctg tgaaggcccc tcccatggag gactgcccgg
301 tgcctccagt gagaagggcc gaaagaccta tcccactgtc aagatctgta actacgaggg
361 accagccaag atcgaggtgg acctggtaac acacagtgac ccacctcgtg ctcatgccca
421 cagtctggtg ggcaagcaat gctcggagct ggggatctgc gccgtttctg tggggcccaa
481 ggacatgact gcccaattta acaacctggg tgtcctgcat gtgactaaga agaacatgat
541 ggggactatg atacaaaaac ttcagaggca gcggctccgc tctaggcccc agggccttac
601 ggaggccgag cagcgggagc tggagcaaga ggccaaagaa ctgaagaagg tgatggatct
661 gagtatagtg cggctgcgct tctctgcctt ccttagagcc agtgatggct ccttctccct
721 gcccctgaag ccagtcatct cccagcccat ccatgacagc aaatctccgg gggcatcaaa
781 cctgaagatt tctcgaatgg acaagacagc aggctctgtg cggggtggag atgaagttta
841 tctgctttgt gacaaggtgc agaaagatga cattgaggtt cggttctatg aggatgatga
901 gaatggatgg caggcctttg gggacttctc tcccacagat gtgcataaac agtatgccat
961 tgtgttccgg acacccccct atcacaagat gaagattgag cggcctgtaa cagtgtttct
1021 gcaactgaaa cgcaagcgag gaggggacgt gtctgattcc aaacagttca cctattaccc
1081 tctggtggaa gacaaggaag aggtgcagcg gaagcggagg aaggccttgc ccaccttctc
1141 ccagcccttc gggggtggct cccacatggg tggaggctct gggggtgcag ccgggggcta
1201 cggaggagct ggaggaggtg gcagcctcgg tttcttcccc tcctccctgg cctacagccc
1261 ctaccagtcc ggcgcgggcc ccatgggctg ctacccggga ggcgggggcg gggcgcagat
1321 ggccgccacg gtgcccagca gggactccgg ggaggaagcc gcggagccga gcgccccctc
1381 caggaccccc cagtgcgagc cgcaggcccc ggagatgctg cagcgagctc gagagtacaa
1441 cgcgcgcctg ttcggcctgg cgcagcgcag cgcccgagcc ctactcgact acggcgtcac
1501 cgcggacgcg cgcgcgctgc tggcgggaca gcgccacctg ctgacggcgc aggacgagaa
1561 cggagacaca ccactgcacc tagccatcat ccacgggcag accagtgtca ttgagcagat
1621 agtctatgtc atccaccacg cccaggacct cggcgttgtc aacctcacca accacctgca
1681 ccagacgccc ctgcacctgg cggtgatcac ggggcagacg agtgtggtga gctttctgct
1741 gcgggtaggt gcagacccag ctctgctgga tcggcatgga gactcagcca tgcatctggc
1801 gctgcgggca ggcgctggtg ctcctgagct gctgcgtgca ctgcttcaga gtggagctcc
1861 tgctgtgccc cagctgttgc atatgcctga ctttgaggga ctgtatccag tacacctggc
1921 ggtccgagcc cgaagccctg agtgcctgga tctgctggtg gacagtgggg ctgaagtgga
1981 ggccactgag cggcaggggg gacgaacagc cttgcatcta gccacagaga tggaggagct
2041 ggggttggtc acccatctgg tcaccaagct ccgggccaac gtgaacgctc gcacctttgc
2101 gggaaacaca cccctgcacc tggcagctgg actggggtac ccgaccctca cccgcctcct
2161 tctgaaggct ggtgctgaca tccatgctga aaacgaggag cccctgtgcc cactgccttc
2221 accccctacc tctgatagcg actcggactc tgaagggcct gagaaggaca cccgaagcag
2281 cttccggggc cacacgcctc ttgacctcac ttgcagcacc aaggtgaaga ccttgctgct
2341 aaatgctgct cagaacacca tggagccacc cctgaccccg cccagcccag cagggccggg
2401 actgtcactt ggtgatacag ctctgcagaa cctggagcag ctgctagacg ggccagaagc
2461 ccagggcagc tgggcagagc tggcagagcg tctggggctg cgcagcctgg tagacacgta
2521 ccgacagaca acctcaccca gtggcagcct cctgcgcagc tacgagctgg ctggcgggga
2581 cctggcaggt ctactggagg ccctgtctga catgggccta gaggagggag tgaggctgct
2641 gaggggtcca gaaacccgag acaagctgcc cagcacagag gtgaaggaag acagtgcgta
2701 cgggagccag tcagtggagc aggaggcaga gaagctgggc ccaccccctg agccaccagg
2761 agggctctgc cacgggcacc cccagcctca ggtgcactga cctgctgcct gcccccagcc
2821 cccttcccgg accccctgta cagcgtcccc acctatttca aatcttattt aacaccccac
2881 acccacccct cagttgggac aaataaagga ttctcatggg aaggggagga cccctccttc
2941 ccaacttaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
3001 aaaaaaaaaa aaaaaa
//