LOCUS BC002830 3189 bp mRNA linear HUM 22-SEP-2005 DEFINITION Homo sapiens ATG3 autophagy related 3 homolog (S. cerevisiae), mRNA (cDNA clone MGC:3478 IMAGE:3633903), complete cds. ACCESSION BC002830 VERSION BC002830.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3189) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3189) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (05-FEB-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Louis M. Staudt, M.D., Ph.D. cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 12 Row: j Column: 2 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 34147490. FEATURES Location/Qualifiers source 1..3189 /db_xref="H-InvDB:HIT000258894" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:3478 IMAGE:3633903" /tissue_type="Lymph, Burkitt lymphoma" /clone_lib="NIH_MGC_8" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..3189 /gene="ATG3" /gene_synonym="APG3" /gene_synonym="DKFZp564M1178" /gene_synonym="FLJ22125" /gene_synonym="MGC15201" /gene_synonym="PC3-96" /db_xref="GeneID:64422" CDS 394..1347 /gene="ATG3" /gene_synonym="APG3" /gene_synonym="DKFZp564M1178" /gene_synonym="FLJ22125" /gene_synonym="MGC15201" /gene_synonym="PC3-96" /codon_start=1 /product="ATG3 protein" /protein_id="AAH02830.1" /db_xref="GeneID:64422" /translation="MQNVINTVKGKALEVAEYLTPVLKESKFKETGVITPEEFVAAGD HLVHHCPTWQWATGEELKVKAYLPTGKQFLVTKNVPCYKRCKQMEYSDELEAIIEEDD GDGGWVDTYHNTGITGITEAVKEITLENKDNIRLQDCSALCEEEEDEDEGEAADMEEY EESGLLETDEATLDTRKIVEACKAKTDAGGEDAILQTRTYDLYITYDKYYQTPRLWLF GYDEQRQPLTVEHMYEDISQDHVKKTVTIENHPHLPPPPMCSVHPCRHAEVMKKIIET VAEGGGELGVHMYPSLYVRLVAKWLLTIFFFEKFSVTLMIQ" BASE COUNT 1104 a 578 c 629 g 878 t ORIGIN 1 ggcacgagga ggaagggaag ccggaagggg cgcgagtgaa gcaaagcgag gacagacagc 61 tcccagaggg cgaggggtgc gtgtgcgtcc gcttctcacc tcaggtctcc cttcggcccc 121 gctgccctcc ctcgcggctg ggtgacagct gggtccggtc cctcgcgggc tgcctggggt 181 gcgaggatcg cgcaccccgt cttcgcgcgc tgtgcctgcc gccccgcccc ctcgtcccgc 241 ccgtcccgtc gcgtcgcgtc ccgtcccctc gggtgctgcc agccgggtgc tgatgcgagt 301 cggtggcagc gaggacattt tctgactccc tggcccctga cacggctgca ctttccatcc 361 cgtcgcgggg ccggccgcta ctccggcccc aggatgcaga atgtgattaa tactgtgaag 421 ggaaaggcac tggaagtggc tgagtacctg accccggtcc tcaaggaatc aaagtttaag 481 gaaacaggtg taattacccc agaagagttt gtggcagctg gagatcacct agtccaccac 541 tgtccaacat ggcaatgggc tacaggggaa gaattgaaag tgaaggcata cctaccaaca 601 ggcaaacaat ttttggtaac caaaaatgtg ccgtgctata agcggtgcaa acagatggaa 661 tattcagatg aattggaagc tatcattgaa gaagatgatg gtgatggcgg atgggtagat 721 acatatcaca acacaggtat tacaggaata acggaagccg ttaaagagat cacactggaa 781 aataaggaca atataaggct tcaagattgc tcagcactat gtgaagagga agaagatgaa 841 gatgaaggag aagctgcaga tatggaagaa tatgaagaga gtggattgtt ggaaacagat 901 gaggctaccc tagatacaag gaaaatagta gaagcttgta aagccaaaac tgatgctggc 961 ggtgaagatg ctattttgca aaccagaact tatgaccttt acatcactta tgataaatat 1021 taccagactc cacgattatg gttgtttggc tatgatgagc aacggcagcc tttaacagtt 1081 gagcacatgt atgaagacat cagtcaggat catgtgaaga aaacagtgac cattgaaaat 1141 caccctcatc tgccaccacc tcccatgtgt tcagttcacc catgcaggca tgctgaggtg 1201 atgaagaaaa tcattgagac tgttgcagaa ggagggggag aacttggagt tcatatgtat 1261 ccttccctgt atgtaagatt agtggcaaaa tggctgttaa cgattttttt ttttgagaaa 1321 tttagtgtaa ccttaatgat acagtagcta taacttgttt taacttctca tctgaaaatc 1381 ctagtagaag tctttcattt atttagaaaa tgttatattg tgatagttat gccttgctta 1441 gttgattaga acatgtcccc atgtgtagca gtagctcacc cttgttacag aggtaactac 1501 taatttagaa taataatatg agtatctttt tcttatgtac atttccagtt taacatgtta 1561 ccaaaaatgt actttcccat caggtaaaag taaaattagg ttgtgtcaat ctgaggtgtc 1621 tctgaagcaa ataattcagc ttaaacaaat acgttaatta aaagtaatgt actacgtgaa 1681 gtgctttaga tattcttaaa atatagtacg ttcatttttc tcaagacagt agcacctttc 1741 ttgtatctta ctatagtttt cctactcagt tttcttggat tgacaaaagt aatacattca 1801 agttaatgcc caagcaaact gttggatcct aaagtacatg cactcatagc atagatttat 1861 caaaaacagt caaaatcaat gatttacatg ccagatagct tgaattagtt tgatgctagg 1921 ttaatacttg acttggtggt ggtttcggct actatgtgtt agattagatg tggagactaa 1981 gatgccacgt ctaatcagac tgtggggcat tgctaataaa gtgtgtccct aagaagaact 2041 ttgaactgat ttgatattga aacaaaccaa aaacttccag tccaaaccat atttactcct 2101 gaagtcctat tatgcctaac tggcacatct ctgctggatg ctaggtagca acttggaaga 2161 ctgtctatat ataattcata atagtaattg gtttccccca atgaaaagta agctcctaat 2221 gtttttaagt gcaatgaaca taaaaaaatt tcagaattta attaaagaca gtccagtaga 2281 gctcagtctt tggcaaatac atacactaac ctagaatcag tctactatac aggattttta 2341 tttaattttt ttctcttttg ctatagtact tcattatagt ctattctgcc tcattttctg 2401 acataactct agcaaactta aaggagtcta gtaaatgagt acattttgta ctcatttaaa 2461 catgtatagc tttgtccttt ttatgtcaaa gtaattgtgc ttatatgaac acctactcat 2521 taagaagttt caaattcaat aatcgaatga gtggtcaggt agtcttaaag agcctcatgt 2581 taaatagaca caaatttaca tagttgaatt ctttaataga cttaatttaa gattttgtgg 2641 ggtttttttg agaaattaat ggcttaataa aatggataat tacaacatgg gcttaaaaca 2701 tagaactatt tacaaatctt attttcctta gctaaaaacc tttaggtatc ttcttatttt 2761 cttgaaattt gtacaagctg tcattccaac aatagaatat gactacacaa gacacttcac 2821 aatgtaatga agagagcata aaatctatcc taattattgg ttctgatttt taaagaatta 2881 acccatagat gtgaccattg accatattca tcaatatata cagtttctct aataagggac 2941 ttatatgttt atgcattaaa taaaaatatg ttccactacc agccttactt gtttaataaa 3001 aatcagtgca aagagaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa 3061 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa 3121 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa 3181 aaaaaaaaa //