LOCUS BC002828 1026 bp mRNA linear HUM 20-DEC-2004
DEFINITION Homo sapiens angiogenic factor with G patch and FHA domains 1, mRNA
(cDNA clone IMAGE:3659316), complete cds.
ACCESSION BC002828
VERSION BC002828.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1026)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1026)
AUTHORS Director MGC Project.
TITLE Direct Submission
JOURNAL Submitted (05-FEB-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC002828.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 12 Row: h Column: 22
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 9558744
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..1026
/db_xref="H-InvDB:HIT000031220"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3659316"
/tissue_type="Uterus, endometrium adenocarcinoma"
/clone_lib="NIH_MGC_44"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1026
/gene="AGGF1"
/gene_synonym="FLJ10283"
/gene_synonym="HSU84971"
/gene_synonym="HUS84971"
/gene_synonym="VG5Q"
/db_xref="GeneID:55109"
/db_xref="MIM:608464"
CDS 323..652
/gene="AGGF1"
/gene_synonym="FLJ10283"
/gene_synonym="HSU84971"
/gene_synonym="HUS84971"
/gene_synonym="VG5Q"
/codon_start=1
/product="AGGF1 protein"
/protein_id="AAH02828.1"
/db_xref="GeneID:55109"
/db_xref="MIM:608464"
/translation="MASEAPSPPRSPPPPTSPEPELAQLRRKVEKLERELRSCKRQVR
EIEKLLHHTERLYQNAESNNQELRTQVRGPPQPRAPSSPGEAFEARDSLGRGPWQGLR
TTVEYLK"
BASE COUNT 248 a 288 c 275 g 215 t
ORIGIN
1 ctggcctctg gttttccgac tgcttatccg acgctcctcc ctctgtctct gtagctggag
61 aaggtagttt ccaggaaagt tttccggttt gcaggccgcg cacatcgggc aggggccatc
121 ctcggtcccc ttgctcgttg ctcgcagccc cgttcggcta caagtgagtt tcagggcgtc
181 atggccaggg gccaccgcgg ccagccgggt gtgaggctgc ctttcgctgc ccgcgcgctc
241 cagtggtctc tgggtccgcc ggcgtccgtt tcggcctgaa cgcagcccct ccgcggcgac
301 gagcagtctc gcgccggagc tcatggcctc ggaggcgccg tccccgccgc ggtcgccgcc
361 gccgcccacc tcccccgagc ctgagctggc ccagctaagg cggaaggtgg agaagttgga
421 acgtgaactg cggagctgca agcggcaggt gcgggagatc gagaagctgc tgcatcacac
481 agaacggctg taccagaacg cagaaagcaa caaccaggag ctccgcacgc aggtgcgcgg
541 tcctcctcag ccccgcgccc catccagccc aggcgaggcc ttcgaagccc gtgatagcct
601 cggaaggggt ccctggcagg ggctcagaac tactgtagag tacttaaagt aaataagtag
661 aagctcagcg cagttacaat tccaagtacc ttaggagcaa acctgagttc aggttacttg
721 atttaaatca atgtctcgcg gctggcgtga attgaactta agtactgtgg ctacattgtc
781 ttcattctca cttgacctaa catcccattg gcagtaggcg catttactgt agatcacatt
841 tgagtttatt aaaatgctgg acttgagtca gaatcccatc tctgctattc actgggtgtg
901 tgaacttata taccgagtct cagttcccca ttaaatgaga atgatagctc acagtagtaa
961 aggtgaagta aaacaaacaa ttttacaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1021 aaaaaa
//