LOCUS BC002820 1504 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens alkB, alkylation repair homolog 4 (E. coli), mRNA
(cDNA clone MGC:3464 IMAGE:3636984), complete cds.
ACCESSION BC002820
VERSION BC002820.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1504)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1504)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-FEB-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Oct 31, 2003 this sequence version replaced BC002820.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 12 Row: f Column: 14.
FEATURES Location/Qualifiers
source 1..1504
/db_xref="H-InvDB:HIT000031214"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:3464 IMAGE:3636984"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_21"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1504
/gene="ALKBH4"
/gene_synonym="FLJ20013"
/db_xref="GeneID:54784"
/db_xref="HGNC:HGNC:21900"
CDS 6..914
/gene="ALKBH4"
/gene_synonym="FLJ20013"
/codon_start=1
/product="alkB, alkylation repair homolog 4 (E. coli)"
/protein_id="AAH02820.1"
/db_xref="GeneID:54784"
/db_xref="HGNC:HGNC:21900"
/translation="MAAAAAETPEVLRECGCKGIRTCLICERQRGSDPPWELPPAKTY
RFIYCSDTGWAVGTEESDFEGWAFPFPGVMLIEDFVTREEEAELVRLMDRDPWKLSQS
GRRKQDYGPKVNFRKQKLKTEGFCGLPSFSREVVRRMGLYPGLEGFRPVEQCNLDYCP
ERGSAIDPHLDDAWLWGERLVSLNLLSPTVLSMCREAPGSLLLCSAPSAAPEALVDSV
IAPSRSVLCQEVEVAIPLPARSLLVLTGAARHQWKHAIHRRHIEARRVCVTFRELSAE
FGPGGRQQELGQELLRIALSFQGRPV"
BASE COUNT 313 a 440 c 473 g 278 t
ORIGIN
1 gcgcgatggc ggcggctgcc gccgagaccc ccgaagtcct tcgggaatgc ggttgcaagg
61 gcatccggac ctgtctgatc tgcgagcggc agcgcggcag tgacccgccc tgggagctgc
121 ccccagcgaa aacataccgt ttcatttact gctccgacac cggctgggcc gtgggcacag
181 aggagtctga ctttgagggc tgggccttcc ccttcccagg agtgatgctg atcgaggact
241 ttgtgacccg ggaggaagaa gccgagttgg tgcggctcat ggaccgtgac ccctggaagc
301 tctcccagtc tggacggagg aagcaggact atggccccaa agtcaacttt cggaaacaga
361 agctaaagac cgagggcttc tgcggcctcc ccagcttcag ccgggaggtg gtgcggagga
421 tgggcctcta cccggggctg gagggcttcc ggcccgtcga gcagtgcaac ctggactact
481 gccccgagcg gggctctgcc attgaccccc acctggacga cgcctggctg tggggggagc
541 ggctggtcag cctcaacctc ctgtccccca ccgtgctgtc catgtgtcgg gaggcgcccg
601 ggagcctgct cctctgctcg gccccgtcgg ctgccccgga ggccttggtg gacagcgtga
661 tagcacccag ccggtcggtg ctatgccagg aggtggaggt ggccatcccc ttacccgccc
721 gctccctgct ggtcctcacc ggggcggcac ggcaccagtg gaagcatgcc atccaccgca
781 gacacatcga ggcccgccgc gtctgcgtca ctttccggga gctgtcggct gagtttggcc
841 ctggagggag gcagcaagag ctgggccagg aactgctgcg gatcgccctc tccttccagg
901 gaagacccgt gtgaaccgcc tccttggctc cagacttgac tgatcccggg attgaaatga
961 ggagcacaga acagggcctc ctgcaactca cggggtttca agagaagatg gctgacccct
1021 gatgctgtga gcagtgtgag ccctgcccag gagcaggttt tgatgggaac gtacctccag
1081 gcagccccct tccacctgga ccgtggccac acttttttgg ttatttagtt tgtcacagtc
1141 ttggggacat gggatcattt gagcttaaaa aatactgggg gccgggcaca gtggctcaca
1201 cctgtaatcc taacactttg ggaggctgag gtgggcggat cacttgatgc caggagttcg
1261 agaccagcct ggccaacacg gtgaaaaccc gtctctacaa aaactacaaa aattagccgg
1321 gtgtggtgac tcacagccgt aatcccagct actcgggagg ctaaggtggg agaattgctt
1381 gaacctggga ggcggaggtt gcagtgagcc aagatcacgc cactgcactc cagcctcggt
1441 gacagagcaa gactgttttg aaaaaaaaaa aaaatgggaa cattttaaaa aaaaaaaaaa
1501 aaaa
//