LOCUS BC002816 1451 bp mRNA linear HUM 04-AUG-2008
DEFINITION Homo sapiens neutrophil cytosolic factor 1, mRNA (cDNA clone
MGC:3937 IMAGE:3633829), complete cds.
ACCESSION BC002816
VERSION BC002816.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1451)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1451)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-FEB-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC002816.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Louis M. Staudt, M.D., Ph.D.
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 12 Row: f Column: 2
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4557784.
FEATURES Location/Qualifiers
source 1..1451
/db_xref="H-InvDB:HIT000031210"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:3937 IMAGE:3633829"
/tissue_type="Lymph, Burkitt lymphoma"
/clone_lib="NIH_MGC_8"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1451
/gene="NCF1"
/gene_synonym="NCF1A"
/gene_synonym="NOXO2"
/gene_synonym="p47phox"
/gene_synonym="SH3PXD1A"
/db_xref="GeneID:653361"
/db_xref="HGNC:HGNC:7660"
/db_xref="MIM:608512"
CDS 71..1243
/gene="NCF1"
/gene_synonym="NCF1A"
/gene_synonym="NOXO2"
/gene_synonym="p47phox"
/gene_synonym="SH3PXD1A"
/codon_start=1
/product="neutrophil cytosolic factor 1"
/protein_id="AAH02816.1"
/db_xref="GeneID:653361"
/db_xref="HGNC:HGNC:7660"
/db_xref="MIM:608512"
/translation="MGDTFIRHIALLGFEKRFVPSQHYVYMFLVKWQDLSEKVVYRRF
TEIYEFHKTLKEMFPIEAGAINPENRIIPHLPAPKWFDGQRAAENRQGTLTEYCSTLM
SLPTKISRCPHLLDFFKVRPDDLKLPTDNQTKKPETYLMPKDGKSTATDITGPIILQT
YRAIANYEKTSGSEMALSTGDVVEVVEKSESGWWFCQMKAKRGWIPASFLEPLDSPDE
TEDPEPNYAGEPYVAIKAYTAVEGDEVSLLEGEAVEVIHKLLDGWWVIRKDDVTGYFP
SMYLQKSGQDVSQAQRQIKRGAPPRRSSIRNAHSIHQRSRKRLSQDAYRRNSVRFLQQ
RRRQARPGPQSPGSPLEEERQTQRSKPQPAVPPRPSADLILNRCSESTKRKLASAV"
BASE COUNT 355 a 459 c 409 g 228 t
ORIGIN
1 cgacttcctc tttccagtgc atttaaggcg cagcctggaa gtgccaggga gcactggagg
61 ccacccagtc atgggggaca ccttcatccg tcacatcgcc ctgctgggct ttgagaagcg
121 cttcgtaccc agccagcact atgtgtacat gttcctggtg aaatggcagg acctgtcgga
181 gaaggtggtc taccggcgct tcaccgagat ctacgagttc cataaaacct taaaagaaat
241 gttccctatt gaggcagggg cgatcaatcc agagaacagg atcatccccc acctcccagc
301 tcccaagtgg tttgacgggc agcgggccgc cgagaaccgc cagggcacac ttaccgagta
361 ctgcagcacg ctcatgagcc tgcccaccaa gatctcccgc tgtccccacc tcctcgactt
421 cttcaaggtg cgccctgatg acctcaagct ccccacggac aaccagacaa aaaagccaga
481 gacatacttg atgcccaaag atggcaagag taccgcgaca gacatcaccg gccccatcat
541 cctgcagacg taccgcgcca ttgccaacta cgagaagacc tcgggctccg agatggctct
601 gtccacgggg gacgtggtgg aggtcgtaga gaagagcgag agcggttggt ggttctgtca
661 gatgaaagca aagcgaggct ggatcccagc gtccttcctc gagcccctgg acagtcctga
721 cgagacggaa gaccctgagc ccaactatgc aggtgagcca tacgtcgcca tcaaggccta
781 cactgctgtg gagggggacg aggtgtccct gctcgagggt gaagctgttg aggtcattca
841 caagctcctg gacggctggt gggtcatcag gaaagacgac gtcacaggct acttcccgtc
901 catgtacctg caaaagtcag ggcaagacgt gtcccaggcc caacgccaga tcaagcgggg
961 ggcgccgccc cgcaggtcgt ccatccgcaa cgcgcacagc atccaccagc ggtcgcggaa
1021 gcgcctcagc caggacgcct atcgccgcaa cagcgtccgt tttctgcagc agcgacgccg
1081 ccaggcgcgg ccgggaccgc agagccccgg gagcccgctc gaggaggagc ggcagacgca
1141 gcgctctaaa ccgcagccgg cggtgccccc gcggccgagc gccgacctca tcctgaaccg
1201 ctgcagcgag agcaccaagc ggaagctggc gtctgccgtc tgaggctgga gcgcagtccc
1261 cagctagcgt ctcggccctt gccgccccgt gcctgtacat acgtgttcta tagagcctgg
1321 cgtctggacg ccgagggcag ccccgacccc tgtccagcgc ggctcccgcc accctcaata
1381 aatgttgctt ggagtgaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1441 aaaaaaaaaa a
//