LOCUS BC002798 1713 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens neutrophil cytosolic factor 4, 40kDa, mRNA (cDNA clone
MGC:3810 IMAGE:3634177), complete cds.
ACCESSION BC002798
VERSION BC002798.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1713)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1713)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-FEB-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Louis M. Staudt, M.D., Ph.D.
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 12 Row: b Column: 4
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 47519797.
FEATURES Location/Qualifiers
source 1..1713
/db_xref="H-InvDB:HIT000031193"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:3810 IMAGE:3634177"
/tissue_type="Lymph, Burkitt lymphoma"
/clone_lib="NIH_MGC_8"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1713
/gene="NCF4"
/gene_synonym="MGC3810"
/gene_synonym="NCF"
/gene_synonym="P40PHOX"
/gene_synonym="SH3PXD4"
/db_xref="GeneID:4689"
/db_xref="HGNC:HGNC:7662"
/db_xref="MIM:601488"
CDS 185..1231
/gene="NCF4"
/gene_synonym="MGC3810"
/gene_synonym="NCF"
/gene_synonym="P40PHOX"
/gene_synonym="SH3PXD4"
/codon_start=1
/product="neutrophil cytosolic factor 4, 40kDa"
/protein_id="AAH02798.1"
/db_xref="GeneID:4689"
/db_xref="HGNC:HGNC:7662"
/db_xref="MIM:601488"
/translation="MAVAQQLRAESDFEQLPDDVAISANIADIEEKRGFTSHFVFVIE
VKTKGGSKYLIYRRYRQFHALQSKLEERFGPDSKSSALACTLPTLPAKVYVGVKQEIA
EMRIPALNAYMKSLLSLPVWVLMDEDVRIFFYQSPYDSEQVPQALRRLRPRTRKVKSV
SPQGNSVDRMAAPRAEALFDFTGNSKLELNFKAGDVIFLLSRINKDWLEGTVRGATGI
FPLSFVKILKDFPEEDDPTNWLRCYYYEDTISTIKSVAWEGGACPAFLPSLRPPPLTS
PSHGSLSHSKAPSGSQMSHNAVTSHQRPGWPGQPHSPFPHPTPHFQPDASLLQPVTPL
GTSRWRKISAALPY"
BASE COUNT 441 a 509 c 451 g 312 t
ORIGIN
1 ggaggaggag cctctgccag actggagaga agcaggcctg agcctcccca aaggcagctc
61 ctggggactc ccaggaccac aggctgagac gagacgcagg gtggctggag gaagtgagag
121 gtgaactcag cctgggactg gctgggcaag actctccacc tgctccctgg gaccatcgcc
181 caccatggct gtggcccagc agctgcgggc cgagagtgac tttgaacagc ttccggatga
241 tgttgccatc tcggccaaca ttgctgacat cgaggagaag agaggcttca ccagccactt
301 tgttttcgtc atcgaggtga agacaaaagg aggatccaag tacctcatct accgccgcta
361 ccgccagttc catgctttgc agagcaagct ggaggagcgc ttcgggccag acagcaagag
421 cagtgccctg gcctgtaccc tgcccacact cccagccaaa gtctacgtgg gtgtgaaaca
481 ggagatcgcc gagatgcgga tacctgccct caacgcctac atgaagagcc tgctcagcct
541 gccggtctgg gtgctgatgg atgaggacgt ccggatcttc ttttaccagt cgccctatga
601 ctcagagcag gtgccccagg cactccgccg gctccgcccg cgcacccgga aagtcaagag
661 cgtgtcccca cagggcaaca gcgttgaccg catggcagct ccgagagcag aggctctatt
721 tgacttcact ggaaacagca aactggagct gaatttcaaa gctggagatg tgatcttcct
781 cctcagtcgg atcaacaaag actggctgga gggcactgtc cggggagcca cgggcatctt
841 ccctctctcc ttcgtgaaga tcctcaaaga cttccctgag gaggacgacc ccaccaactg
901 gctgcgttgc tactactacg aagacaccat cagcaccatc aagtctgtgg cctgggaggg
961 aggggcctgt ccagccttcc tgccatccct acgaccaccg cccctcacat caccttctca
1021 tgggtccctc tcccactcca aagcccccag tggctcccag atgagccaca atgctgtaac
1081 aagccatcaa cgtccagggt ggcctggcca gcctcattcc cctttccccc accccacacc
1141 ccacttccag cctgatgcct ccttactcca gcctgtcacc cccttaggga catcgcggtg
1201 gaggaagatc tcagcagcac tcccctattg aaagacctgc tggagctcac aaggcgggag
1261 ttccagagag aggacatagc tctgaattac cgggacgctg agggggatct ggttcggctc
1321 ctgtcggatg aggacgtagc gctcatggtg cggcaggctc gtggcctccc ctcccagaag
1381 cgcctcttcc cctggaagct gcacatcacg cagaaggaca actacagggt ctacaacacg
1441 atgccatgag ctgacggtgt ccctggagca gtgaggggac accagcaaaa accttcagct
1501 ctcagaggag attgggacca ggaaaacctg ggaggatggg cagacttcct gtctttgagg
1561 ctaatggacc cgtggggctt gtaatctgtc tctttctact atttacatct gatttaaata
1621 aaccattcca tctgaaaggg gaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1681 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaa
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