LOCUS BC002797 1925 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens CKLF-like MARVEL transmembrane domain containing 6,
mRNA (cDNA clone MGC:3456 IMAGE:3633497), complete cds.
ACCESSION BC002797
VERSION BC002797.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1925)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1925)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-FEB-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC002797.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 12 Row: b Column: 2
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 32130534.
FEATURES Location/Qualifiers
source 1..1925
/db_xref="H-InvDB:HIT000031192"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:3456 IMAGE:3633497"
/tissue_type="Ovary, adenocarcinoma"
/clone_lib="NIH_MGC_9"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1925
/gene="CMTM6"
/gene_synonym="FLJ20396"
/gene_synonym="PRO2219"
/db_xref="GeneID:54918"
/db_xref="HGNC:HGNC:19177"
/db_xref="MIM:607889"
CDS 123..674
/gene="CMTM6"
/gene_synonym="FLJ20396"
/gene_synonym="PRO2219"
/codon_start=1
/product="CKLF-like MARVEL transmembrane domain containing
6"
/protein_id="AAH02797.1"
/db_xref="GeneID:54918"
/db_xref="HGNC:HGNC:19177"
/db_xref="MIM:607889"
/translation="MENGAVYSPTTEEDPGPARGPRSGLAAYFFMGRLPLLRRVLKGL
QLLLSLLAFICEEVVSQCTLCGGLYFFEFVSCSAFLLSLLILIVYCTPFYERVDTTKV
KSSDFYITLGTGCVFLLASIIFVSTHDRTSAEIAAIVFGFIASFMFLLDFITMLYEKR
QESQLRKPENTTRAEALTEPLNA"
BASE COUNT 524 a 358 c 415 g 628 t
ORIGIN
1 caggcggaag ccggggagaa ggcccaggaa gtgacggccg cctcccggct accggggact
61 tctggagtcc gagaagtcaa cggcgcggtt gctgcggccg ccgcgctccc cggcccgagg
121 cgatggagaa cggagcggtg tacagcccca ctacggagga ggacccgggc cccgccagag
181 gcccccggag cggcctcgct gcctactttt tcatgggccg gctcccattg ctccggcgcg
241 ttctcaaggg cttgcagctg ttgctgtctc tgctggcctt catctgtgaa gaagttgtat
301 cacaatgtac tttatgtgga ggactttatt tttttgagtt tgtaagctgc agtgcctttc
361 ttctgagtct ccttatactg attgtgtatt gcactccatt ttatgagaga gttgatacca
421 caaaagtaaa atcatcggat ttttatatta ctttgggaac aggatgtgtg tttttgttgg
481 catccatcat ttttgtttcc acacatgaca ggacttcagc tgagattgct gcaattgtgt
541 ttggatttat agcaagtttt atgttcctac ttgactttat cactatgctg tatgaaaaac
601 gacaggagtc ccagctgaga aaacctgaaa ataccactag ggctgaagcc ctcactgagc
661 cacttaatgc ctaaagactc tggggagcag atgttaccta aggtagtgac cctgcattgt
721 ggtgcctgag ccctggcaga agctcttgta aaatttgtta attgtttaaa ccacttcttt
781 tggagagcaa ggggaaggtc aagaaggcag ttttatcaat attgtgtcag tcaccacaaa
841 gtaggccaga taagttaaaa aaaatttttt tttaaataat aattgaaact tatctcaaat
901 ggagattttg gtgggaggag gagaaaacaa ttgtttttaa atcacacagc tcaacggttg
961 ataaatgatt ctgtcattct gttacaggtc attcttttac taggcttagc ttccaaatta
1021 tgctttatag ctgtataaac atcgtgatta tattcatcta cttagaaatt gttttatttt
1081 taaattaatt tgcttagctg tttgttttga tgcttagatt atgttctgtt aatgggaatt
1141 taacatattt aagaaaccaa tatttaaaat gttggtctag gtttttttcc ttaacatata
1201 ttaccaggct ttactgtatt tcactcagcc ttaaatgtta taatattttt ggataacggt
1261 tattaattct ttgagacctt cgtatagcct ataaaatgta tgggagatgt tggtatttta
1321 tgtgtataaa agcaacaata tcagcaactt cgtgtttata ctgcaccttg gttgttgatg
1381 tcaagtaaaa aaaagattgt tttgtaacac ataaaaaaat ggaagaaact gataccacac
1441 ctaaggacca aagataagaa agactttttg cccaagacag tgaaagtaat tataaaaaca
1501 agctttgacc acttaccaag tatctgaaga gatgagttca tactatgatt tagaaagtgg
1561 ttcaattccc ctgttggcat atgattattt ttactaaaat taatacagct ctgtgggtct
1621 tccttagtgt tttctttgaa gccaatctgt tttttttagg acaccagcct ttggtttttc
1681 atctgttcga gatgcctctt ctctgtctcc ttatcagata gaaatggagt catgtgctgc
1741 tgcttcatct agcagaggtt ggcctctggc tctgacactt tttgtcagtt gtctttaggt
1801 ggtcctgaat cttgggccct tttgattgtg aatactgtgt agcaggatct tgagagtcct
1861 tgttcttaca taggcattgc tctagtttgt ctttggcaaa aaaaaaaaaa aaaaaaaaaa
1921 aaaaa
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