LOCUS BC002784 1098 bp mRNA linear HUM 16-SEP-2003
DEFINITION Homo sapiens splicing factor, arginine/serine-rich 11, mRNA (cDNA
clone IMAGE:3615263), partial cds.
ACCESSION BC002784
VERSION BC002784.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1098)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1098)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (05-FEB-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC002784.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 12 Row: h Column: 7
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 23111060.
FEATURES Location/Qualifiers
source 1..1098
/db_xref="H-InvDB:HIT000086164"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3615263"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_20"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..>1098
/gene="SFRS11"
/gene_synonym="dJ677H15.2"
/gene_synonym="p54"
/db_xref="GeneID:9295"
/db_xref="MIM:602010"
CDS 136..>1098
/gene="SFRS11"
/gene_synonym="dJ677H15.2"
/gene_synonym="p54"
/codon_start=1
/product="SFRS11 protein"
/protein_id="AAH02784.1"
/db_xref="GeneID:9295"
/db_xref="MIM:602010"
/translation="MSNTTVVPSTAGPGPSGGPGGGGGGGGGGGGTEVIQVTNVSPSA
SSEQMRTLFGFLGKIDELRLFPPDDSPLPVSSRVCFVKFHDPDSAVVAQHLTNTVFVD
RALIVVPYAEGVIPDEAKALSLLAPANAVAGLLPGGGLLPTPNPLTQIGAVPLAALGA
PTLDPALAALGLPGANLNSQSLAADQLLKLMSTVDPKLNHVAAGLVSPSLKSDTSSKE
IEEAMKRVREAQSLISAAIEPDKKEEKRRHSRSRSRSRRRRTPSSSRHRRSRSRSRRR
SHSKSRSRRRSKSPRRRRSHSRERGRRSRSTSKTRDKKKKKKKKK"
misc_feature 235..456
/gene="SFRS11"
/gene_synonym="dJ677H15.2"
/gene_synonym="p54"
/note="RRM; Region: RNA recognition motif"
/db_xref="CDD:smart00360"
BASE COUNT 285 a 280 c 282 g 251 t
ORIGIN
1 catcggcagc agtagcagag gctgtagcat cggacaccct cctctctccc gcaatccggt
61 tcctcttccc cctccttctc actgtttgtt gtgtgtttga tgtgttaaag caggagcgag
121 aacccgagca gcgccatgag caacactacc gtcgtcccca gcactgcagg tccgggcccc
181 agcggcgggc ccggtggcgg aggtggtggt ggcggcggag gcggcggcac cgaggtaatc
241 caggtgacta atgtctcccc gagcgctagc tctgagcaga tgcggactct cttcggtttc
301 ctaggcaaga tcgacgaact gcgcctcttc ccgccggatg attcgccttt gccagtctca
361 tctcgtgtct gctttgttaa gttccatgat ccagactcag cagttgtggc acagcatctg
421 acaaacactg tattcgttga cagagctttg atagtcgtac catatgcaga aggagttatt
481 cctgatgaag ctaaagcttt gtctctgttg gcaccagcta atgcagtggc aggtcttctg
541 cctggtggtg gactcctgcc tactcctaac ccacttaccc agattggcgc tgttccactg
601 gctgctttgg gggctcctac tcttgatcct gcccttgctg cacttgggct tcctggagca
661 aacttgaact ctcagtctct tgctgcagat cagttgctga agcttatgag tactgttgat
721 cccaagttga atcatgtagc tgctggtctc gtttcaccaa gtctgaaatc ggatacctct
781 agtaaagaaa tagaggaagc tatgaaaaga gtacgagaag cacagtccct aatttctgct
841 gctatagaac cagataagaa agaagaaaaa agaaggcatt caagatcaag atcacgttct
901 aggaggagga ggactccctc atcttctaga cacaggcggt caagaagcag atcgagacgg
961 cggtcacatt ctaagtctag gagtcggcga cgatccaaaa gcccaaggcg gagaagatct
1021 cattccagag aaagaggtag aaggtcaagg agcacatcaa aaacaagaga caaaaagaaa
1081 aaaaaaaaaa aaaaaaaa
//