LOCUS BC002633 1236 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens coiled-coil domain containing 109B, mRNA (cDNA clone
MGC:3443 IMAGE:3613298), complete cds.
ACCESSION BC002633
VERSION BC002633.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1236)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1236)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-FEB-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC002633.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 12 Row: a Column: 23
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 34147587.
FEATURES Location/Qualifiers
source 1..1236
/db_xref="H-InvDB:HIT000031051"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:3443 IMAGE:3613298"
/tissue_type="Uterus, endometrium adenocarcinoma"
/clone_lib="NIH_MGC_44"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1236
/gene="CCDC109B"
/gene_synonym="FLJ20647"
/db_xref="GeneID:55013"
/db_xref="HGNC:HGNC:26076"
CDS 342..1088
/gene="CCDC109B"
/gene_synonym="FLJ20647"
/codon_start=1
/product="coiled-coil domain containing 109B"
/protein_id="AAH02633.1"
/db_xref="GeneID:55013"
/db_xref="HGNC:HGNC:26076"
/translation="MLSTVGSFLQDLQNEDKGIKTAAIFTADGNMISASTLMDILLMN
DFKLVINKIAYDVQCPKREKPSNEHTAEMEHMKSLVHRLFTILHLEESQKKREHHLLE
KIDHLKEQLQPLEQVKAGIEAHSEAKTSGLLWAGLALLSIQGGALAWLTWWVYSWDIM
EPVTYFITFANSMVFFAYFIVTRQDYTYSAVKSRQFLQFFHKKSKQQHFDVQQYNKLK
EDLAKAKESLKQARHSLCLQMQVEELNEKN"
BASE COUNT 365 a 267 c 283 g 321 t
ORIGIN
1 caggcgctga cgaggagccc ggctgaggga ggatgcgccg ctgacgcctg cgggagccgc
61 gcgcctgggg cgggaggatg ctccagaggg gcctctggcc gtggcgcacg cggctgctgc
121 cgacccctgg cacctggcgc ccagcgcgcc cgtggccgct gccgcctccg ccccaggttt
181 tgcgtgtgaa gctgtgtgga aatgtgaaat actaccagtc acaccattat agtaccgtgg
241 tgccacctga tgaaataaca gttatttata gacatggcct tcccttggta acacttacct
301 tgccatctag aaaagaacgt tgtcaattcg tagtcaaacc aatgttgtca acagttggtt
361 cattccttca ggacctacaa aatgaagata agggtatcaa aactgcagcc atcttcacag
421 cagatggcaa catgatttca gcttctacct tgatggatat tttgctaatg aatgatttta
481 aacttgtcat taataaaata gcatatgatg tgcagtgtcc aaagagagaa aaaccaagta
541 atgagcacac tgctgagatg gaacacatga aatccttggt tcacagacta tttacaatct
601 tgcatttaga agagtctcag aaaaagagag agcaccattt actggagaaa attgaccacc
661 tgaaggaaca gctgcagccc cttgaacagg tgaaagctgg aatagaagct cattcggaag
721 ccaaaaccag tggactcctg tgggctggat tggcactgct gtccattcag ggtggggcac
781 tggcctggct cacgtggtgg gtgtactcct gggatatcat ggagccagtt acatacttca
841 tcacatttgc aaattctatg gtcttttttg catactttat agtcactcga caggattata
901 cttactcagc tgttaagagt aggcaatttc ttcagttctt ccacaagaaa tcaaagcaac
961 agcactttga tgtgcagcaa tacaacaagt taaaagaaga ccttgctaag gctaaagaat
1021 ccctgaaaca ggcgcgtcat tctctctgtt tgcaaatgca agtagaagaa ctcaatgaaa
1081 agaattaatc ttacagtttt aaatgtcgtc agattttcca ttatgtattg attttgcaac
1141 ttaggatgtt tttgagtccc atggttcatt ttgattgttt aatctttgtt attaaattct
1201 tgtaaaacag aaaaaaaaaa aaaaaaaaaa aaaaaa
//