LOCUS BC002613 851 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens chromosome 9 open reading frame 142, mRNA (cDNA clone
MGC:2999 IMAGE:3161564), complete cds.
ACCESSION BC002613
VERSION BC002613.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 851)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 851)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-FEB-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC002613.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 4 Row: n Column: 20
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 39930540.
FEATURES Location/Qualifiers
source 1..851
/db_xref="H-InvDB:HIT000050410"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:2999 IMAGE:3161564"
/tissue_type="Brain, neuroblastoma"
/clone_lib="NIH_MGC_19"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..851
/gene="C9orf142"
/db_xref="GeneID:286257"
/db_xref="HGNC:HGNC:27849"
CDS 27..641
/gene="C9orf142"
/codon_start=1
/product="chromosome 9 open reading frame 142"
/protein_id="AAH02613.2"
/db_xref="GeneID:286257"
/db_xref="HGNC:HGNC:27849"
/translation="MDPLSPPLCTLPPGPEPPRFVCYCEGEESGEGDRGGFNLYVTDA
AELWSTCFTPDSLAALKARFGLSAAEDITPRFRAACEQQAVALTLQEDRASLTLSGGP
SALAFDLSKVPGPEAAPRLRALTLGLAKRVWSLERRLAAAEETAVSPRKSPRPAGPQL
FLPDPDPQRGGPGPGVRRRCPGESLINPGFKSKKPAGGVDFDET"
BASE COUNT 186 a 274 c 263 g 128 t
ORIGIN
1 cgccgggttc ccgctcgccc ggcgccatgg atccgctgtc gccgccgctc tgcacgctgc
61 cgccgggccc cgagccgccc cgcttcgtgt gctactgcga aggggaggaa agcggggagg
121 gggaccgcgg cggcttcaac ctctacgtga ccgacgccgc ggagctttgg agcacctgct
181 tcacgccgga cagcctggcg gccctcaaag cccgttttgg cctgagtgcg gctgaggaca
241 tcaccccccg gttcagggca gcctgtgagc agcaagctgt ggctctgact ctgcaggagg
301 acagagcatc cctgacgctt tcaggggggc cctcggcact ggcctttgac ctctccaagg
361 taccaggccc agaggcagcc cccaggctgc gggcgctgac actgggcctg gcaaaacgcg
421 tgtggagcct ggagcggcga ctggcagctg cagaagagac agctgtcagc ccgaggaaga
481 gcccccggcc tgcagggcct cagctcttct taccagaccc agatccccag agaggtggcc
541 ctggacctgg agtcaggagg cggtgtccag gagagtcgct catcaacccc gggttcaaga
601 gtaagaaacc agctggtggc gtggacttcg atgagacctg aaggtgcagc acaagcgtgg
661 ccccgcgggg agtccgccta tgaggggaga ggcagtcttt gaggccccca tcagagaccc
721 cccgccacca cctccacctg cctgtcctgg gccaggacta acacggctcc tcaaattcct
781 tccctgtcaa ataaacagct cccttggttg gaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
841 aaaaaaaaaa a
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