LOCUS BC002612 2128 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens fukutin related protein, mRNA (cDNA clone MGC:2991
IMAGE:3160297), complete cds.
ACCESSION BC002612
VERSION BC002612.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2128)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2128)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-FEB-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC002612.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 4 Row: n Column: 16
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 36951139.
FEATURES Location/Qualifiers
source 1..2128
/db_xref="H-InvDB:HIT000031035"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:2991 IMAGE:3160297"
/tissue_type="Brain, neuroblastoma"
/clone_lib="NIH_MGC_19"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2128
/gene="FKRP"
/gene_synonym="FLJ12576"
/gene_synonym="LGMD2I"
/gene_synonym="MDC1C"
/gene_synonym="MGC2991"
/db_xref="GeneID:79147"
/db_xref="HGNC:HGNC:17997"
/db_xref="MIM:606596"
CDS 94..1581
/gene="FKRP"
/gene_synonym="FLJ12576"
/gene_synonym="LGMD2I"
/gene_synonym="MDC1C"
/gene_synonym="MGC2991"
/codon_start=1
/product="fukutin related protein"
/protein_id="AAH02612.1"
/db_xref="GeneID:79147"
/db_xref="HGNC:HGNC:17997"
/db_xref="MIM:606596"
/translation="MRLTRCQAALAAAITLNLLVLFYVSWLQHQPRNSRARGPRRASA
AGPRVTVLVREFEAFDNAVPELVDSFLQQDPAQPVVVAADTLPYPPLALPRIPNVRLA
LLQPALDRPAAASRPETYVATEFVALVPDGARAEAPGLLERMVEALRAGSARLVAAPV
ATANPARCLALNVSLREWTARYGAAPAAPRCDALDGDAVVLLRARDLFNLSAPLARPV
GTSLFLQTALRGWAVQLLDLTFAAARQPPLATAHARWKAEREGRARRAALLRALGIRL
VSWEGGRLEWFGCNKETTRCFGTVVGDTPAYLYEERWTPPCCLRALRETARYVVGVLE
AAGVRYWLEGGSLLGAARHGDIIPWDYDVDLGIYLEDVGNCEQLRGAEAGSVVDERGF
VWEKAVEGDFFRVQYSESNHLHVDLWPFYPRNGVMTKDTWLDHRQDVEFPEHFLQPLV
PLPFAGFVAQAPNNYRRFLELKFGPGVIENPQYPNPALLSLTGSG"
BASE COUNT 354 a 694 c 722 g 358 t
ORIGIN
1 ggagagacaa gtaaactctc agagtaactg tcccctctga ctaccatttc taaggatgcc
61 ccggaggccc agctagcccc agacttcggc cccatgcggc tcacccgctg ccaggctgcc
121 ctggcggccg ccatcaccct caaccttctg gtcctcttct atgtctcgtg gctgcagcac
181 cagcctagga attcccgggc ccgggggccc cgtcgtgcct ctgctgccgg cccccgtgtc
241 accgtcctgg tgcgggagtt cgaggcattt gacaacgcgg tgcccgagct ggtagactcc
301 ttcctgcagc aagacccagc ccagcccgtg gtggtggcag ccgacacgct cccctacccg
361 cccctggccc tgccccgcat ccccaacgtg cgtctggcgc tgctccagcc cgccctggac
421 cggccagccg cagcctcgcg cccggagacc tacgtggcca ccgagtttgt ggccctagta
481 cctgatgggg cgcgggctga ggcacctggc ctgctggagc gcatggtgga ggcgctccgc
541 gcaggaagcg cacgtctggt ggccgccccg gttgccacgg ccaaccctgc caggtgcctg
601 gccctgaacg tcagcctgcg agagtggacc gcccgctatg gcgcagcccc cgccgcgccc
661 cgctgcgacg ccctggacgg agatgctgtg gtgctcctgc gcgcccgcga cctcttcaac
721 ctctcggcgc ccctggcccg gccggtgggc accagcctct ttctgcagac cgcccttcgc
781 ggctgggcgg tgcagctgct ggacttgacc ttcgccgcgg cgcgccagcc cccgctggcc
841 acggcccacg cgcgctggaa ggctgagcgc gagggacgcg ctcggcgggc ggcgctgctc
901 cgcgcgctgg gcatccgcct agtgagctgg gaaggcgggc ggctggagtg gttcggctgc
961 aacaaggaga ccacgcgctg cttcggaacc gtggtgggcg acacgcccgc ctacctctac
1021 gaggagcgct ggacgccccc ctgctgcctg cgcgcgctgc gcgagaccgc ccgctatgtg
1081 gtgggcgtgc tggaggctgc gggcgtgcgc tactggctcg agggcggctc actgctgggg
1141 gccgcccgcc acggggacat catcccatgg gactacgacg tggacctggg catctacttg
1201 gaggacgtgg gcaactgcga gcagctgcgg ggggcagagg ccggctcggt ggtggatgag
1261 cgcggcttcg tatgggagaa ggcggtcgag ggcgactttt tccgcgtgca gtacagcgaa
1321 agcaaccact tgcacgtgga cctgtggccc ttctaccccc gcaatggcgt catgaccaag
1381 gacacgtggc tggaccaccg gcaggatgtg gagtttcccg agcacttcct gcagccgctg
1441 gtgcccctgc cctttgccgg cttcgtggcg caggcgccta acaactaccg ccgcttcctg
1501 gagctcaagt tcgggcccgg ggtcatcgag aacccccagt accccaaccc ggcactgctg
1561 agtctgacgg gaagcggctg aagccctgat aacctcgcct ttgtttttcg ggggtctgtc
1621 tggatgtgga gaagctctgt gtgagcggtg aggggtggag ggatgtcgcg gagaggggaa
1681 gggggaaact gaccaagaaa gaaattctaa ggagagcatg agagaaggct ggcattggca
1741 ggaggagagc accaggacga ggatgggaag cgacctccag atttatcaaa tggtcatgcc
1801 cactgggagc cgtggatatg cgtggggaca tcctgggtca tctcagtcat ggagggagac
1861 ggggatgtca cgccgtcccg cagggcccag cacagcccca gacccgaaaa aagtgttctg
1921 cccaagattc cgagagccct gcgctctagg gcaggggcag agttttggaa acagtgcagg
1981 ctctggagcc agactggcga gattcaaatc ctggctctat cgcttcggag ccaggtgggc
2041 ctgggggggc gtcgcagtct ctctgtgcct cagttgcttc caggatgcgg gacccttggc
2101 tgcaggggtt aaaaaaaaaa aaaaaaaa
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