LOCUS BC002601 1575 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens nuclear factor of kappa light polypeptide gene
enhancer in B-cells inhibitor, alpha, mRNA (cDNA clone MGC:2289
IMAGE:3161686), complete cds.
ACCESSION BC002601
VERSION BC002601.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1575)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1575)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-FEB-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC002601.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 4 Row: j Column: 22
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 10092618.
FEATURES Location/Qualifiers
source 1..1575
/db_xref="H-InvDB:HIT000031026"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:2289 IMAGE:3161686"
/tissue_type="Brain, neuroblastoma"
/clone_lib="NIH_MGC_19"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1575
/gene="NFKBIA"
/gene_synonym="IKBA"
/gene_synonym="MAD-3"
/db_xref="GeneID:4792"
/db_xref="HGNC:HGNC:7797"
/db_xref="MIM:164008"
CDS 103..1056
/gene="NFKBIA"
/gene_synonym="IKBA"
/gene_synonym="MAD-3"
/codon_start=1
/product="nuclear factor of kappa light polypeptide gene
enhancer in B-cells inhibitor, alpha"
/protein_id="AAH02601.1"
/db_xref="GeneID:4792"
/db_xref="HGNC:HGNC:7797"
/db_xref="MIM:164008"
/translation="MFQAAERPQEWAMEGPRDGLKKERLLDDRHDSGLDSMKDEEYEQ
MVKELQEIRLEPQEVPRGSEPWKQQLTEDGDSFLHLAIIHEEKALTMEVIRQVKGDLA
FLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTPLHLACEQGCLASV
GVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGR
TALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLEN
LQMLPESEDEESYDTESEFTEFTEDELPYDDCVFGGQRLTL"
BASE COUNT 398 a 407 c 417 g 353 t
ORIGIN
1 gcagtccgtg ccgccgtccc gcccgccagc gccccagcga ggaagcagcg cgcagcccgc
61 ggcccagcgc acccgcagca gcgcccgcag ctcgtccgcg ccatgttcca ggcggccgag
121 cgcccccagg agtgggccat ggagggcccc cgcgacgggc tgaagaagga gcggctactg
181 gacgaccgcc acgacagcgg cctggactcc atgaaagacg aggagtacga gcagatggtc
241 aaggagctgc aggagatccg cctcgagccg caggaggtgc cgcgcggctc ggagccctgg
301 aagcagcagc tcaccgagga cggggactcg ttcctgcact tggccatcat ccatgaagaa
361 aaggcactga ccatggaagt gatccgccag gtgaagggag acctggcctt cctcaacttc
421 cagaacaacc tgcagcagac tccactccac ttggctgtga tcaccaacca gccagaaatt
481 gctgaggcac ttctgggagc tggctgtgat cctgagctcc gagactttcg aggaaatacc
541 cccctacacc ttgcctgtga gcagggctgc ctggccagcg tgggagtcct gactcagtcc
601 tgcaccaccc cgcacctcca ctccatcctg aaggctacca actacaatgg ccacacgtgt
661 ctacacttag cctctatcca tggctacctg ggcatcgtgg agcttttggt gtccttgggt
721 gctgatgtca atgctcagga gccctgtaat ggccggactg cccttcacct cgcagtggac
781 ctgcaaaatc ctgacctggt gtcactcctg ttgaagtgtg gggctgatgt caacagagtt
841 acctaccagg gctattctcc ctaccagctc acctggggcc gcccaagcac ccggatacag
901 cagcagctgg gccagctgac actagaaaac cttcagatgc tgccagagag tgaggatgag
961 gagagctatg acacagagtc agagttcacg gagttcacag aggacgagct gccctatgat
1021 gactgtgtgt ttggaggcca gcgtctgacg ttatgagtgc aaaggggctg aaagaacatg
1081 gacttgtata tttgtacaaa aaaaaagttt tatttttcta aaaaaagaaa aaagaagaaa
1141 aaatttaaag ggtgtactta tatccacact gcacactgcc tagcccaaaa cgtcttattt
1201 tgtggtagga tcagccctca ttttgttgct tttgtgaact ttttgtaggg gacgagaaag
1261 atcattgaaa ttctgagaaa acttctttta aacctcacct ttgtggggtt tttggagaag
1321 gttatcaaaa atttcatgga aggaccacat tttatattta ttgtgcttcg agtgactgac
1381 cccagtggta tcctgtgaca tgtaacagcc aggagtgtta agcgttcagt gatgtggggt
1441 gaaaagttac tacctgtcaa ggtttgtgtt accctcctgt aaatggtgta cataatgtat
1501 tgttggtaat tattttggta cttttatgat gtatatttat taaacagatt tttacaaaaa
1561 aaaaaaaaaa aaaaa
//