LOCUS BC002592 2179 bp mRNA linear HUM 28-JUL-2005
DEFINITION Homo sapiens solute carrier family 11 (proton-coupled divalent
metal ion transporters), member 2, mRNA (cDNA clone MGC:1990
IMAGE:3160522), complete cds.
ACCESSION BC002592
VERSION BC002592.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2179)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2179)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-FEB-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC002592.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 4 Row: h Column: 16
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 10835168.
FEATURES Location/Qualifiers
source 1..2179
/db_xref="H-InvDB:HIT000031019"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:1990 IMAGE:3160522"
/tissue_type="Brain, neuroblastoma"
/clone_lib="NIH_MGC_19"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2179
/gene="SLC11A2"
/gene_synonym="DCT1"
/gene_synonym="DMT1"
/db_xref="GeneID:4891"
/db_xref="MIM:600523"
CDS 93..1778
/gene="SLC11A2"
/gene_synonym="DCT1"
/gene_synonym="DMT1"
/codon_start=1
/product="SLC11A2 protein"
/protein_id="AAH02592.1"
/db_xref="GeneID:4891"
/db_xref="MIM:600523"
/translation="MVLGPEQKMSDDSVSGDHGESASLGNINPAYSNPSLSQSPGDSE
EYFATYFNEKISIPEEEYSCFSFRKLWAFTGPGFLMSIAYLDPGNIESDLQSGAVAGF
KLLWILLLATLVGLLLQRLAARLGVVTGLHLAEVCHRQYPKVPRVILWLMVELAIIGS
DMQEVIGSAIAINLLSVGRIPLWGGVLITIADTFVFLFLDKYGLRKLEAFFGFLITIM
ALTFGYEYVTVKPSQSQVLKGMFVPSCSGCRTPQIEQAVGIVGAVIMPHNMYLHSALV
KSRQVNRNNKQEVREANKYFFIESCIALFVSFIINVFVVSVFAEAFFGKTNEQVVEVC
TNTSSPHAGLFPKDNSTLAVDIYKGGVVLGCYFGPAALYIWAVGILAAGQSSTMTGTY
SGQFVMEGFLNLKWSRFARVVLTRSIAIIPTLLVAVFQDVEHLTGMNDFLNVLQSLQL
PFALIPILTFTSLRPVMSDFANGLGWRIAGGILVLIICSINMYFVVVYVRDLGHVALY
VVAAVVSVAYLGFVFYLGWQCLIALGMSFLDCGHTVSISKGLLTEEATRGYVK"
BASE COUNT 528 a 484 c 522 g 645 t
ORIGIN
1 gcaccatgag gaagaagcag ctgaagacgg aggcagctcc acactgtgaa ctaaaatcat
61 attctaagaa ctcagccact caggtatcca ccatggtgct gggtcctgaa cagaagatgt
121 cagatgacag tgtttctgga gatcatgggg agtctgccag tcttggtaac atcaaccctg
181 cctatagtaa tccctctctt tcacagtccc ctggggactc agaggagtac ttcgccactt
241 actttaatga gaagatctcc attcctgagg aggagtactc ttgttttagc tttcgtaaac
301 tctgggcttt caccggacca ggttttctta tgagcattgc ctacctggat ccaggaaata
361 ttgaatccga tttgcagtct ggagcagtgg ctggatttaa gttgctctgg atccttctgt
421 tggccaccct tgtggggctg ctgctccagc ggcttgcagc tagactggga gtggttactg
481 ggctgcatct tgctgaagta tgtcaccgtc agtatcccaa ggtcccacga gtcatcctgt
541 ggctgatggt ggagttggct atcatcggct cagacatgca agaagtcatt ggctcagcca
601 ttgctatcaa tcttctgtct gtaggaagaa ttcctctgtg gggtggcgtt ctcatcacca
661 ttgcagatac ttttgtattt ctcttcttgg acaaatatgg cttgcggaag ctagaagcat
721 tttttggctt tctcatcact attatggccc tcacatttgg atatgagtat gttacagtga
781 aacccagcca gagccaggta ctcaagggca tgttcgtacc atcctgttca ggctgtcgca
841 ctccacagat tgaacaggct gtgggcatcg tgggagctgt catcatgcca cacaacatgt
901 acctgcattc tgccttagtc aagtctagac aggtaaaccg gaacaataag caggaagttc
961 gagaagccaa taagtacttt ttcattgaat cctgcattgc actctttgtt tccttcatca
1021 tcaatgtctt tgttgtctca gtctttgctg aagcattttt tgggaaaacc aacgagcagg
1081 tggttgaagt ctgtacaaat accagcagtc ctcatgctgg cctctttcct aaagataact
1141 cgacactggc tgtggacatc tacaaagggg gtgttgtgct gggatgttac tttgggcctg
1201 ctgcactcta catttgggca gtggggatcc tggctgcagg acagagctcc accatgacag
1261 gaacctattc tggccagttt gtcatggagg gattcctgaa cctaaagtgg tcacgctttg
1321 cccgagtggt tctgactcgc tctattgcca tcatccccac tctgcttgtt gctgtcttcc
1381 aagatgtaga gcatctaaca gggatgaatg actttctgaa tgttctacag agcttacagc
1441 ttccctttgc tctcataccc atcctcacat ttacgagctt gcggccagta atgagtgact
1501 ttgccaatgg actaggctgg cggattgcag gaggaatctt ggtccttatc atctgttcca
1561 tcaatatgta ctttgtagtg gtttatgtcc gggacctagg gcatgtggca ttatatgtgg
1621 tggctgctgt ggtcagcgtg gcttatctgg gctttgtgtt ctacttgggt tggcaatgtt
1681 tgattgcact gggcatgtcc ttcctggact gtgggcatac ggtaagcatc tctaaaggcc
1741 tgctgacaga agaagccacc cgtggctacg ttaaataaca ctggattagt ctgtcttctg
1801 caggtagcca tcagagccag tgtgtttcta tggtttactg tgtgaacata gccaaaagta
1861 tgtgccgttg cacagactgt gtttatgact caaccgttgg ttggaaaaga ctttgtttca
1921 tgtgtatttg aaagatggaa ttattttttc cttcctgacc taaccttaga actggattag
1981 ggtgggatct ttgaaaagct gacatttgct gctatcattc caacactaaa ttcttaagta
2041 gttgcccaag ggccagctca gtttatcctt cggagagaca aggatatgca tgattcttaa
2101 ccaggctata tgttaaaaaa aaattggaaa atgcaataca ttttttatta tacaaactaa
2161 aaaaaaaaaa aaaaaaaaa
//