LOCUS BC002538 4121 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens serpin peptidase inhibitor, clade B (ovalbumin),
member 9, mRNA (cDNA clone MGC:2131 IMAGE:3140427), complete cds.
ACCESSION BC002538
VERSION BC002538.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4121)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4121)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-FEB-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC002538.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 4 Row: o Column: 20
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 34147494.
FEATURES Location/Qualifiers
source 1..4121
/db_xref="H-InvDB:HIT000030974"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:2131 IMAGE:3140427"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_21"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..4121
/gene="SERPINB9"
/gene_synonym="CAP-3"
/gene_synonym="CAP3"
/db_xref="GeneID:5272"
/db_xref="HGNC:HGNC:8955"
/db_xref="MIM:601799"
CDS 84..1214
/gene="SERPINB9"
/gene_synonym="CAP-3"
/gene_synonym="CAP3"
/codon_start=1
/product="serpin peptidase inhibitor, clade B (ovalbumin),
member 9"
/protein_id="AAH02538.1"
/db_xref="GeneID:5272"
/db_xref="HGNC:HGNC:8955"
/db_xref="MIM:601799"
/translation="METLSNASGTFAIRLLKILCQDNPSHNVFCSPVSISSALAMVLL
GAKGNTATQMAQALSLNTEEDIHRAFQSLLTEVNKAGTQYLLRTANRLFGEKTCQFLS
TFKESCLQFYHAELKELSFIRAAEESRKHINTWVSKKTEGKIEELLPGSSIDAETRLV
LVNAIYFKGKWNEPFDETYTREMPFKINQEEQRPVQMMYQEATFKLAHVGEVRAQLLE
LPYARKELSLLVLLPDDGVELSTVEKSLTFEKLTAWTKPDCMKSTEVEVLLPKFKLQE
DYDMESVLRHLGIVDAFQQGKADLSAMSAERDLCLSKFVHKSFVEVNEEGTEAAAASS
CFVVAECCMESGPRFCADHPFLFFIRHNRANSILFCGRFSSP"
BASE COUNT 1048 a 937 c 838 g 1298 t
ORIGIN
1 ctgcgcctcg ggggtcggcg tccaggctcg gagcgcggca cggagacggc ggcagcgctg
61 gactaggtgg caggccctgc atcatggaaa ctctttctaa tgcaagtggt acttttgcca
121 tacgcctttt aaagatactg tgtcaagata acccttcgca caacgtgttc tgttctcctg
181 tgagcatctc ctctgccctg gccatggttc tcctaggggc aaagggaaac accgcaaccc
241 agatggccca ggcactgtct ttaaacacag aggaagacat tcatcgggct ttccagtcgc
301 ttctcactga agtgaacaag gctggcacac agtacctgct gagaacggcc aacaggctct
361 ttggagagaa aacttgtcag ttcctctcaa cgtttaagga atcctgtctt caattctacc
421 atgctgagct gaaggagctt tcctttatca gagctgcaga agagtccagg aaacacatca
481 acacctgggt ctcaaaaaag accgaaggta aaattgaaga gttgttgccg ggtagctcaa
541 ttgatgcaga aaccaggctg gttcttgtca atgccatcta cttcaaagga aagtggaatg
601 aaccgtttga cgaaacatac acaagggaaa tgccctttaa aataaaccag gaggagcaaa
661 ggccagtgca gatgatgtat caggaggcca cgtttaagct cgcccacgtg ggcgaggtgc
721 gcgcgcagct gctggagctg ccctacgcca ggaaggagct gagcctgctg gtgctgctgc
781 ctgacgacgg cgtggagctc agcacggtgg aaaaaagtct cacttttgag aaactcacag
841 cctggaccaa gccagactgt atgaagagta ctgaggttga agttctcctt ccaaaattta
901 aactacaaga ggattatgac atggaatctg tgcttcggca tttgggaatt gttgatgcct
961 tccaacaggg caaggctgac ttgtcggcaa tgtcagcgga gagagacctg tgtctgtcca
1021 agttcgtgca caagagtttt gtggaggtga atgaagaagg caccgaggca gcggcagcgt
1081 cgagctgctt tgtagttgca gagtgctgca tggaatctgg ccccaggttc tgtgctgacc
1141 accctttcct tttcttcatc aggcacaaca gagccaacag cattctgttc tgtggcaggt
1201 tctcatcgcc ataaagggtg cacttaccgt gcactcggcc atttccctct tcctgtgtcc
1261 ccagatcccc actacagctc caagaggatg ggcctagaaa gccaagtgca aagatgaggg
1321 cagattcctt acctgtctgc cctcatgatt tgccagcatg aattcatgat gctccacact
1381 cgcttatgct acttaatcag aatcttgaga aaatagacca taatgattcc ctgttgtatt
1441 aaaattgcag tccaaatccc ataggatggc aagcaaagtt cttctagaat tccacatgca
1501 attcactctg gcgaccctgt gctttcctga cactgcgaat acattcctta acccgctgcc
1561 tcagtggtaa taaatggtgc tagatattgc tactatttta tagatttcct ggtgcttagc
1621 cttataaaaa aggttgtaaa atgtacattt atattttatc tttttttttt ttttttttct
1681 gagacgcagt ctggctctct gtcgcccagg ctggagtgca gtggctcgat ctctgctcac
1741 tgcaagctcc gcctcccggg ttcacgccat tctcctgcct cagcctcccg agtagctggg
1801 actacaggcg cccgccacca cgcccggcta attttttgta tttttagtag agacggggtt
1861 tcaccgtgtt agccaggatg gtgtcgatct cctgacctcg tgatccaccc gcctcggcct
1921 cccaaagtgc tgggattaca ggcttgagcc accgcgcccg gctatatttt atcttttatc
1981 tttttctttg acatttacca atcaccaagc atgcaccaaa cactgcttta ggcactgggg
2041 acacaaaggg gacagagcca tcctcctttg acacctggtc ttcagttctg tgcccaacgt
2101 atatagtttt gacaatgacc aggttggact gtttaatgtc tttcaactta ccacgtaatc
2161 ctcttgtagg gatcacatct ttctttatga tattgtattt ctctacctct aacagtaaaa
2221 attccattca acccttaaag ctcacttcaa attcttcttt gagaagtttt tcctttctcc
2281 gcaaccagat gtacatattt gaactctctt tgtacttgga gggcacttct ttcgtggtag
2341 ttcttttatt tttattaatc tctgtatcct tagatagtcc tccaacaacc aaaggttggg
2401 actctgtctt acatatctgg gtgcccctca tagtgcagta ataagtaagt tgattatata
2461 cgagctatgt aacttatatt ttttaatggt tggatatcac tgagtttttt tttttaagaa
2521 tttttttatt gaggtaaact tcacataaca taaaattaac tattttaaag tgagaagttc
2581 agtgccactt agtattgtta acaatgttgc ataaccacca cctttattta aagttccaaa
2641 aaaaatgttc tcctctaaaa ggaaacccca tcccattaag cagatactct ccattccttc
2701 cttcctccag cccccagcaa ccaccaatct gctttctgtc tctatggttt tatctattct
2761 tgctatttta tataaatcga attgtatgag accttttgtg tctggcttct ttcacttagt
2821 acaagttttt gagatttatt tacatagtag catgtatcaa cacttcattt ttatggccaa
2881 ataaaattgt attatgtgtt tatagcacaa tttatttatc cactcattca ttgatggact
2941 ttgggttgtt tctgactttt ggctattggg aatagtgctg ctatgaatgt ttgtgtacct
3001 gtatttgttt gaatgcctat tttgcattct cttgggtata tatctaggag tggaactgct
3061 gggtcatatg ttaattctat gtttagcttt ttgaggaaca gacaaactgt tttccacagc
3121 agttgaacca ttccacattc ccaccagcaa tgtatgagaa ttccaatttc tgtccacttc
3181 ctcaccaaca cttattattt tccttttcct ttttttaaaa aaaataagtt atggccatct
3241 tagtgggtgt gaagtggtat ctcattgtgt tttttatttg catttcctat gtaatgagct
3301 agaaactaaa gtacaaacta gatgggacat ccagtccctt tgatagataa tgctgagtaa
3361 aaaatgagat gaaagacatt tgtttgtttt tagaacatga gtgacagttt gttaaaaagc
3421 tttagaggag gaatgaaaac aaagtgaagt acacttagaa aagggccaag tggacatctt
3481 ggatgtcaag tgcctagttc agtatctttt tttttttttt tttttttttt gagacagtgc
3541 ctcactctgt cacccaggct ggagtgtagt ggcatgatct gggctcactg caacctcctc
3601 ctcctggatt caagcaattc tcttgcttca gcctcccaag tagctgagac tacaagcacc
3661 caccaccaca cccggctaat tttgtatttt tcagtagaga cggggtttcg ccacattggc
3721 cgtgttggtc ttgaactcct ggcctcaagc aatccgccta cctcagcctc ccaaagtgct
3781 aggattacag gcataagcca ctgagcccag ccctagttca gtatctttta tgtaaattat
3841 aaacatctgc aacattatgt atcatatgca gatacttatt gcatttcttt tattagtggt
3901 gaaagtgttc tatgcattta ttggctcttg aatttcctca tctatgaatt gtcattcaca
3961 cacctacttt tctgcttcgt ttttacatat gtctttgcct attaaagata ttatccctct
4021 gttttatatt ttctctcatt cttgtattgc cttttaaatt ttgttatgat gtttcattaa
4081 taaacagtgt tttgttttcc tctataaaaa aaaaaaaaaa a
//