LOCUS BC002526 706 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens heat shock 70kDa protein 4, mRNA (cDNA clone
IMAGE:3139645), complete cds.
ACCESSION BC002526
VERSION BC002526.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 706)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 706)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-FEB-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC002526.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 4 Row: i Column: 10
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 38327038
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..706
/db_xref="H-InvDB:HIT000030965"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3139645"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_21"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..706
/gene="HSPA4"
/gene_synonym="APG-2"
/gene_synonym="HS24/P52"
/gene_synonym="hsp70"
/gene_synonym="hsp70RY"
/gene_synonym="RY"
/db_xref="GeneID:3308"
/db_xref="HGNC:HGNC:5237"
/db_xref="MIM:601113"
CDS 201..647
/gene="HSPA4"
/gene_synonym="APG-2"
/gene_synonym="HS24/P52"
/gene_synonym="hsp70"
/gene_synonym="hsp70RY"
/gene_synonym="RY"
/codon_start=1
/product="heat shock 70kDa protein 4"
/protein_id="AAH02526.1"
/db_xref="GeneID:3308"
/db_xref="HGNC:HGNC:5237"
/db_xref="MIM:601113"
/translation="MSVVGIDLGFQSCYVAVARAGGIETIANEYSDRCTPACISFGPK
NRSIGAAAKSQVISNAKNTVQGFKRFHGRAFSDPFVEAEKSNLAYDIVQLPTGLTGIK
VTYMEEEQNGPVDGQGDNPGPQAAEQGTDTAVPSDSDKKLPEMDID"
BASE COUNT 189 a 182 c 191 g 144 t
ORIGIN
1 ggccactgag ccggagccgg cctgagcagc gctctcggtt gcagtaccca ctggaaggac
61 ttaggcgctc gcgtggacac cgcaagcccc tcagtagcct cggcccaaga ggcctgcttt
121 ccactcgcta gccccgccgg gggtccgtgt cctgtctcgg tggccggacc cgggcccgag
181 cccgagcagt agccggcgcc atgtcggtgg tgggcataga cctgggcttc cagagctgct
241 acgtcgctgt ggcccgcgcc ggcggcatcg agactatcgc taatgagtat agcgaccgct
301 gcacgccggc ttgcatttct tttggtccta agaatcgttc aattggagca gcagctaaaa
361 gccaggtaat ttctaatgca aagaacacag tccaaggatt taaaagattc catggccgag
421 cattctctga tccatttgtg gaggcagaaa aatctaacct tgcatatgat attgtgcagt
481 tgcctacagg attaacaggt ataaaggtga catatatgga ggaagagcag aatggaccag
541 tggatggaca aggagacaac ccaggccccc aggctgctga gcagggtaca gacacagctg
601 tgccttcgga ttcagacaag aagcttcctg aaatggacat tgattgattc caacacttgt
661 ttctattaaa acagactatt ataaaaaaaa aaaaaaaaaa aaaaaa
//