LOCUS BC002517 1190 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens pirin (iron-binding nuclear protein), mRNA (cDNA clone
MGC:2083 IMAGE:3140037), complete cds.
ACCESSION BC002517
VERSION BC002517.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1190)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1190)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-FEB-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC002517.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 4 Row: c Column: 18
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 66363696.
FEATURES Location/Qualifiers
source 1..1190
/db_xref="H-InvDB:HIT000030958"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:2083 IMAGE:3140037"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_21"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1190
/gene="PIR"
/db_xref="GeneID:8544"
/db_xref="HGNC:HGNC:30048"
/db_xref="MIM:603329"
CDS 100..972
/gene="PIR"
/codon_start=1
/product="pirin (iron-binding nuclear protein)"
/protein_id="AAH02517.1"
/db_xref="GeneID:8544"
/db_xref="HGNC:HGNC:30048"
/db_xref="MIM:603329"
/translation="MGSSKKVTLSVLSREQSEGVGARVRRSIGRPELKNLDPFLLFDE
FKGGRPGGFPDHPHRGFETVSYLLEGGSMAHEDFCGHTGKMNPGDLQWMTAGRGILHA
EMPCSEEPAHGLQLWVNLRSSEKMVEPQYQELKSEEIPKPSKDGVTVAVISGEALGIK
SKVYTRTPTLYLDFKLDPGAKHSQPIPKGWTSFIYTISGDVYIGPDDAQQKIEPHHTA
VLGEGDSVQVENKDPKRSHFVLIAGEPLREPVIQHGPFVMNTNEEISQAILDFRNAKN
GFERAKTWKSKIGN"
BASE COUNT 357 a 260 c 287 g 286 t
ORIGIN
1 cttcgcgtca cccccgccgc taaggctcca ggtgccgcta ccgcagcccc tccatcctct
61 acagctcagc atcagaacac tctcttttta gactccgata tggggtcctc caagaaagtt
121 actctctcag tgctcagccg ggagcagtcg gaaggggttg gagcgagggt ccggagaagc
181 attggcagac ccgagttaaa aaatctggat ccgtttttac tgtttgatga atttaaagga
241 ggtagaccag gaggatttcc tgatcatcca catcgaggtt ttgaaacagt atcctacctc
301 ctggaagggg gcagcatggc ccatgaagac ttctgtggac acactggtaa aatgaaccca
361 ggagatttgc agtggatgac tgcgggccgg ggcattctgc acgctgagat gccttgctca
421 gaggagccag cccatggcct acaactgtgg gttaatttga ggagctcaga gaagatggtg
481 gagcctcagt accaggaact gaaaagtgaa gaaatcccta aacccagtaa ggatggtgtg
541 acagttgctg tcatttctgg agaagccctg ggaataaagt ccaaggttta cactcgcaca
601 ccaaccttat atttggactt caaattggac ccaggagcca aacattccca acctatccct
661 aaagggtgga caagcttcat ttacacgata tctggagatg tgtatattgg gcccgatgat
721 gcacaacaaa aaatagaacc tcatcacaca gcagtgcttg gagaaggtga cagtgtccag
781 gtggagaaca aggatcccaa gagaagccac tttgtcttaa ttgctgggga gccattaaga
841 gaaccagtta tccaacatgg tccatttgtg atgaacacca atgaagagat ttctcaagct
901 attcttgatt tcagaaacgc aaaaaatggg tttgaaaggg ccaaaacctg gaaatcaaag
961 attgggaact agtggaaagc ggaagagcag gtcttgatgt gtcctagaat tttgccattt
1021 ctgagattga gccattgaag gcattccatt tctaaagctt atttagccgg tgcttctaaa
1081 gaattccaca ctaacgtgat aacatggttt ttgtaacaat aaatgtagga tatttcctgg
1141 cacatgcaaa taaacctaat cattgtttct ttaaaaaaaa aaaaaaaaaa
//