LOCUS BC002514 2821 bp mRNA linear HUM 25-JUN-2004
DEFINITION Homo sapiens Hermansky-Pudlak syndrome 1, mRNA (cDNA clone
IMAGE:3140170), partial cds.
ACCESSION BC002514
VERSION BC002514.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2821)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2821)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (05-FEB-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Oct 8, 2003 this sequence version replaced BC002514.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 4 Row: a Column: 14
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4504484.
FEATURES Location/Qualifiers
source 1..2821
/db_xref="H-InvDB:HIT000086138"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3140170"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_21"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
BASE COUNT 570 a 886 c 797 g 568 t
ORIGIN
1 ggtacgtggg cctccgggct gtcccctctg ggggcggcga tcctccctcc ggagcccccc
61 ttcaaccctc ccggaagtga gcatttgcag gaccagggat gctgtgctgc tctcccatga
121 gccagtcacc gagtcggtct gctgcagccc tttctgaacc tctggccgtc tggatgctcc
181 actgtgcttg ccaagatgaa gtgcgtcttg gtggccactg agggcgcaga ggtcctcttc
241 tactggacag atcaggagtt tgaagagagt ctccggctga agttcgggca gtcagagaat
301 gaggaagaag agctccctgc cctggaggac cagctcagca ccctcctagc cccggtcatc
361 atctcctcca tgacgatgct ggagaagctc tcggacacct acacctgctt ctccacggaa
421 aatggcaact tcctgtatgt ccttcacctg tttggagaat gcctgttcat tgccatcaat
481 ggtgaccaca ccgagagcga gggggacctg cggcggaagc tgtatgtgct caagtacctg
541 tttgaagtgc actttgggct ggtgactgtg gacggtcatc ttatccgaaa ggagctgcgg
601 cccccagacc tggcgcagcg tgtccagctg tgggagcact tccagagcct gctgtggacc
661 tacagccgcc tgcgggagca ggagcagtgc ttcgccgtgg aggtgactac tgggcgcggg
721 agtcctcagg acttgaagct gtcaggccct ggagcgactg attcaccccc agctctgtga
781 gctgtgcata gaggcgctgg agcggcacgt catccaggct gtcaacacca gccccgagcg
841 gggaggcgag gaggccctgc atgccttcct gctcgtgcac tccaagctgc tggcattcta
901 ctctagccac agtgccagct ccctgcgccc ggccgacctg cttgccctca tcctcctggt
961 tcaggacctc taccccagcg agagcacagc agaggacgac attcaggaga cagacagctt
1021 ctccctccct gaggagtact tcacaccagc tccttcccct ggcgatcaga gctcaggtag
1081 caccatctgg ctggaggggg gcaccccccc catggatgcc cttcagatag cagaggacac
1141 cctccaaaca ctggttcccc actgccctgt gccttccggc cccagaagga tcttcctgga
1201 tgccaacgtg aaggaaagct actgccccct agtgccccac accatgtact gcctgcccct
1261 gtggcagggc atcaacctgg tgctcctgac caggagcccc agcgcgcccc tggccctggt
1321 tctgtcccag ctgatggatg gcttctccat gctggagaag aagctgaagg aagggccgga
1381 gcccggggcc tccctgcgct cccagcccct cgtgggagac ctgcgccaga ggatggacaa
1441 gtttgtcaag aatcgagggg cacaggagat tcagagcacc tggctggagt ttaaggccaa
1501 ggctttctcc aaaagtgagc ccggatcctc ctgggagctg ctccaggcat gtgggaagct
1561 gaagcggcag ctctgcgcca tctaccggct gaactttctg accacagccc ccagcagggg
1621 aggcccacac ctgccccagc acctgcagga ccaagtgcag aggctcatgc gggagaagct
1681 gacggactgg aaggacttct tgctggtgaa gagcaggagg aacatcacca tggtgtccta
1741 cctagaagac ttcccaggct tggtgcactt catctatgtg gaccgcacca ctgggcagat
1801 ggtggcgcct tccctcaact gcagtcaaaa gacctcgtcg gagttgggca aggggccgct
1861 ggctgccttt gtcaaaacta aggtctggtc tctgatccag ctggcgcgca gatacctgca
1921 gaagggctac accacgctgc tgttccagga gggggatttc tactgctcct acttcctgtg
1981 gttcgagaat gacatggggt acaaactcca gatgatcgag gtgcccgtcc tctccgacga
2041 ctcagtgcct atcggcatgc tgggaggaga ctactacagg aagctcctgc gctactacag
2101 caagaaccgc ccaaccgagg ctgtcaggtg ctacgagctg ctggccctgc acctgtctgt
2161 catccccact gacctgctgg tgcagcaggc cggccagctg gcccggcgcc tctgggaggc
2221 ctcccgtatc cccctgctct aggccaaggt ggccgcagtc tgcctttgca tcctgtcctc
2281 cagccaccct tgcttgccac tgttccccat gacgagagcc tcctgtctgc agtggccatc
2341 ctgaggatag ggcagagtgc ccagggtggc cccagggctt ctaaaacccc acctagacca
2401 ccctccatgt caggtactga gcaaggcccc agatccttct ctctggagga agagggaagc
2461 ccaggggtcc tgtttgtaaa acaacggtgg caacagctcc tcttccagag ctgtctctgc
2521 ctttatcctg ggagatgggg aggaagcccc atctctgctg ttccccgcgt ggaggaagcc
2581 cacccagcaa gctctctcct accccaggta aaaggtgctc ctttgcctgg gtttgaattc
2641 cagcgctgcc acttcctctc tgcacctcct ggcaagtttc ttctattccc cacatttaaa
2701 gcgatggcac ctccgtccca gggtggtgtg aggattaccc agtgtggtag gtgctcaata
2761 aatgttggtc attgttatca ctgaagccca aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
2821 a
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