LOCUS BC002489 2951 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens WD repeat domain 1, mRNA (cDNA clone MGC:1382
IMAGE:3051319), complete cds.
ACCESSION BC002489
VERSION BC002489.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2951)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2951)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-FEB-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC002489.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 4 Row: a Column: 23
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 53729351.
FEATURES Location/Qualifiers
source 1..2951
/db_xref="H-InvDB:HIT000030935"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:1382 IMAGE:3051319"
/tissue_type="Colon, adenocarcinoma"
/clone_lib="NIH_MGC_15"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2951
/gene="WDR1"
/gene_synonym="AIP1"
/gene_synonym="NORI-1"
/db_xref="GeneID:9948"
/db_xref="HGNC:HGNC:12754"
/db_xref="MIM:604734"
CDS 75..1895
/gene="WDR1"
/gene_synonym="AIP1"
/gene_synonym="NORI-1"
/codon_start=1
/product="WD repeat domain 1"
/protein_id="AAH02489.1"
/db_xref="GeneID:9948"
/db_xref="HGNC:HGNC:12754"
/db_xref="MIM:604734"
/translation="MPYEIKKVFASLPQVERGVSKIIGGDPKGNNFLYTNGKCVILRN
IDNPALADIYTEHAHQVVVAKYAPSGFYIASGDVSGKLRIWDTTQKEHLLKYEYQPFA
GKIKDIAWTEDSKRIAVVGEGREKFGAVFLWDSGSSVGEITGHNKVINSVDIKQSRPY
RLATGSDDNCAAFFEGPPFKFKFTIGDHSRFVNCVRFSPDGNRFATASADGQIYIYDG
KTGEKVCALGGSKAHDGGIYAISWSPDSTHLLSASGDKTSKIWDVSVNSVVSTFPMGS
TVLDQQLGCLWQKDHLLSVSLSGYINYLDRNNPSKPLHVIKGHSKSIQCLTVHKNGGK
SYIYSGSHDGHINYWDSETGENDSFAGKGHTNQVSRMTVDESGQLISCSMDDTVRYTS
LMLRDYSGQGVVKLDVQPKCVAVGPGGYAVVVCIGQIVLLKDQRKCFSIDNPGYEPEV
VAVHPGGDTVAIGGVDGNVRLYSILGTTLKDEGKLLEAKGPVTDVAYSHDGAFLAVCD
ASKVVTVFSVADGYSENNVFYGHHAKIVCLAWSPDNEHFASGGMDMMVYVWTLSDPET
RVKIQDAHRLHHVSSLAWLDEHTLVTTSHDASVKEWTITY"
BASE COUNT 723 a 764 c 808 g 656 t
ORIGIN
1 gcgaggtgta attcgcagcg cgggccggcc ccggaggctc tcggcgagcg cggcgcggta
61 acaagtgggc gaggatgccg tacgagatca agaaggtgtt cgccagcctc ccgcaggtgg
121 agaggggcgt ctccaagatc atcggcggcg accctaaggg caacaatttt ctgtacacca
181 atggaaagtg cgtcatccta aggaacatcg acaacccagc ccttgctgac atctacacag
241 agcacgccca tcaggtggtg gtggccaagt atgcgcccag cggattctac attgcctccg
301 gagatgtgtc tgggaagctg aggatctggg ataccacgca gaaggagcac ctgttgaagt
361 atgagtacca gcctttcgct gggaagatca aagacattgc ttggactgaa gacagtaaga
421 ggatcgccgt ggtcggggaa ggaagggaga agtttggagc agtcttcctc tgggatagtg
481 gctcttctgt gggcgagatt acaggacaca acaaagtcat caacagcgtg gacatcaagc
541 agagccggcc ataccggctg gccacgggaa gcgatgataa ctgcgcggca ttctttgagg
601 gacccccatt caagttcaag ttcacaattg gcgaccacag ccgctttgtc aactgtgtgc
661 gattctctcc tgatgggaac agatttgcca cagccagtgc tgacggccag atatacatct
721 atgacgggaa gactggggag aaggtgtgcg cgctgggcgg aagcaaggcc cacgacggtg
781 ggatttacgc aattagttgg agtcccgaca gcacccattt gctttctgct tctggggaca
841 aaacttccaa gatttgggac gtcagcgtga actccgtggt cagcacattt cccatgggct
901 ccacggttct ggaccagcag ctgggctgcc tatggcagaa ggaccacctg ctcagtgtct
961 ccctgtccgg gtacatcaac tatctggaca gaaacaaccc cagcaagccc ctgcacgtca
1021 tcaagggtca cagtaaatcg atccagtgtc tgacggtgca taaaaacggc ggcaagtcct
1081 acatttactc tgggagccac gacggacaca ttaattactg ggattcagag acgggggaga
1141 acgactcctt cgctgggaaa ggccacacga accaggtgtc caggatgacc gtggatgagt
1201 cggggcagct catcagctgc agcatggacg acaccgtgcg gtacaccagc ctcatgctgc
1261 gggactacag cggacaagga gttgtgaaac tggacgttca gccaaagtgc gtagccgtcg
1321 gccccggggg atacgccgtg gtcgtgtgca ttggacagat tgtcctgctg aaggatcaga
1381 ggaagtgctt cagcatcgac aaccccggct acgagcccga agttgtggca gtgcaccccg
1441 gcggggacac ggtggcaatt gggggtgtgg acggcaacgt ccgcctgtat tccatcctgg
1501 gcaccacgtt gaaggatgag ggcaagctcc tagaggccaa gggccccgtg accgacgtgg
1561 cctactccca cgacggcgcc ttcctcgcgg tgtgcgacgc cagcaaggtg gtcacagtgt
1621 tcagcgttgc tgacggctac tcggagaaca atgtttttta tggacaccat gcaaaaatcg
1681 tctgcctggc ctggtcccca gacaatgaac actttgcctc cggtggcatg gacatgatgg
1741 tgtatgtttg gaccctgagt gacccggaaa ccagagtcaa gatccaagat gcacaccggc
1801 tgcaccatgt cagcagcctg gcctggctgg acgagcacac gctggtcacg acctcccatg
1861 atgcctctgt caaggagtgg acaatcacct actgaggagc cccacccccg cctctggatg
1921 gaccgaatca gggactagag tttaactgca gcggaacatg tcatttctct atttctgtga
1981 cgcgccccca tgcccccacc ccaccacaag aggcaggagg gcccagtcat gaccctcgtc
2041 tctgcagggt gtctgtacac gttcttctga aagctttaga cagtaacagt ttgcacatga
2101 aaaataaagc gagcacctaa acaatgtgtg gagcataact aaaacccaca gcccaaccaa
2161 accttgagaa tgcgaaacat tccagaggca gtagcctcca aagcacacag agcccctggc
2221 cccgccgcgg ctctcactat ctgtcagggg aggttgtaca ggtgaatgag ccggggggct
2281 catgttcctg cttgcagaac atttctgtac tagtgagaag agggaatatg cattgcagtt
2341 cagcaaagcc ggaattctgt gttgaacaga tgtctgtctc cctagtgtgt gactcacacc
2401 ttgtggctgc cttcagagcg ccacctccag atcagatggg gacacacaac ccctggatat
2461 gtttcattgt cagattttgt gcttgatttt aagaatggaa ttgtgggtat ctttcctttt
2521 tttttaatgt atcttaactg ttgcctgtca gtgtttacaa actagtgcgt tgacggcacc
2581 gtgtccaagt ttttagaacc cttgttagcc agaccgaggt gtcctggtca ccgtttcacc
2641 atcatgcttt gatgttcccc tgtctttccc tcttctgctc tcaagagcaa aggttaattt
2701 aaggacaaag atgaagtcac tgtaaactaa tctgtcattg tttttacctt ccttttcttt
2761 ttcagtgcag aaattaaaag taagtataaa gcaccgtgat tgggagtgtt tttgcgtgtg
2821 tcggaatcac tggtaaatgt tggctgagaa caatccctcc ccttgcactt gtgaaaacac
2881 tttgagcgct ttaagagatt agcctgagaa ataattaaat atcttttctc ttcaaaaaaa
2941 aaaaaaaaaa a
//